CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL002401
(
Heliconius melpomene
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HMEL002401
T119442_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.756
0.783
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.756
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL002401-PA
C2H2 ZF
160
184
YECEYPGCGKNYFKSSHLKAHARTH
HMEL002401-PA
C2H2 ZF
190
214
FQCRWPGCERRFSRSDELSRHKRTH
HMEL002401-PA
C2H2 ZF
220
242
FGCRVCSRRFMRSDHLAKHVKRH
Links
Other
C2H2 ZF
family TFs
Other
Heliconius melpomene
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action