CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL004320
(
Heliconius melpomene
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
HMEL004320
T119466_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.796
0.906
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.796
0.906
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.796
0.906
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.796
0.899
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.796
0.899
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL004320-PA
C2H2 ZF
172
194
FACGDCGKVFNAHYNLTRHMPVH
HMEL004320-PA
C2H2 ZF
200
222
FVCKICGKGFRQASTLCRHKIIH
HMEL004320-PA
C2H2 ZF
228
250
HKCLTCGKAFNRSSTLNTHARIH
HMEL004320-PA
C2H2 ZF
256
278
FVCEFCGKGFHQKGNYKNHRLTH
HMEL004320-PA
C2H2 ZF
284
306
YKCNICNKAFHQIYNLTFHMHTH
HMEL004320-PA
C2H2 ZF
312
335
FTCSICAKGFCRNFDLKKHTRKLH
Links
Other
C2H2 ZF
family TFs
Other
Heliconius melpomene
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000012675
Astyanax mexicanus
ENSAMXG00000012675
I
0.000
ENSAMXG00000017435
Astyanax mexicanus
ENSAMXG00000017435
N
0.000
max
Danio rerio
ENSDARG00000024844
I
0.000
MAX
Gasterosteus aculeatus
ENSGACG00000005981
N
0.000
ENSLOCG00000012423
Lepisosteus oculatus
ENSLOCG00000012423
N
0.000
ENSONIG00000005773
Oreochromis niloticus
ENSONIG00000005773
N
0.000
ENSONIG00000012071
Oreochromis niloticus
ENSONIG00000012071
N
0.000
max
Oryzias latipes
ENSORLG00000019517
N
0.000
ENSPFOG00000017744
Poecilia formosa
ENSPFOG00000017744
I
0.000
ENSXMAG00000007826
Xiphophorus maculatus
ENSXMAG00000007826
N
0.000