CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KAFR_0A07120
(
Kazachstania africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KAFR_0A07120
T120350_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
USV1
M01538_2.00
Saccharomyces cerevisiae
NYCCCTKD
HMAGGGRN
PBM
Zhu et al.(2009)
Usv1
0.771
0.826
USV1
M00041_2.00
Saccharomyces cerevisiae
NCCCCTGD
HCAGGGGN
PBM
Badis et al.(2008)
YPL230W_2051
0.771
0.826
USV1
M08544_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
Misc
DeBoer et al.(2011)
YPL230W_509
0.771
0.826
KTB10507.1
M01040_2.00
Candida glabrata
NBCCCTKR
YMAGGGVN
PBM
Siggers et al.(2014)
CAGL0L00583gCgla
0.758
0.804
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF56146
C2H2 ZF
26
51
FKCTGFEDCNMAFTRAEHLVRHIRKH
CCF56146
C2H2 ZF
57
80
FQCYICLKFFSRVDNLKQHRDTVH
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania africana
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_038710
Albugo laibachii
ALNC14_038710
N
ALNC14_045170
Albugo laibachii
ALNC14_045170
N
F443_08670
Phytophthora parasitica
F443_08670
N
fgenesh_scip_prom.28083.5589
Phytophthora lateralis
fgenesh_scip_prom.28083.5589
N
fgenesh_scip_prom.46568.4406
Phytophthora kernoviae
fgenesh_scip_prom.46568.4406
N
HpaG811065
Hyaloperonospora arabidopsidis
HpaG811065
N
maker-pag1_scaffold_818-snap-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_818-snap-gene-0.3
N
maker-pir_contig_67-snap-gene-0.23
Pythium irregulare
maker-pir_contig_67-snap-gene-0.23
N
maker-pve_contig_870-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_870-fgenesh-gene-0.0
N
Phyra86538
Phytophthora ramorum
Phyra86538
N
Physo140839
Phytophthora sojae
Physo140839
N
PITG_06748
Phytophthora infestans
PITG_06748
N
PYU1_G010470
Pythium ultimum
PYU1_G010470
N
SPRG_00677
Saprolegnia parasitica
SPRG_00677
N