MTR_4g027440 (Medicago truncatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 MTR_4g027440 T123793_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.812 0.848
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.812 0.826
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.799 0.696
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.788 0.761
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.776 0.696
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.776 0.696
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.776 0.696
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.775 0.696
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.717
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.717
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH29190 C2H2 ZF 220 242
KEH29190 C2H2 ZF 278 300

Links

Other C2H2 ZF family TFs
Other Medicago truncatula TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007349 Ailuropoda melanoleuca ENSAMEG00000007349 N 0.000
ZNF606 Bos taurus ENSBTAG00000003456 N 0.000
ZNF606 Canis familiaris ENSCAFG00000029776 N 0.000
ZNF606 Callithrix jacchus ENSCJAG00000000374 N 0.000
ENSCSAG00000001613 Chlorocebus sabaeus ENSCSAG00000001613 N 0.000
ENSDORG00000009776 Dipodomys ordii ENSDORG00000009776 N 0.000
ZNF606 Equus caballus ENSECAG00000001316 N 0.000
ZNF606 Erinaceus europaeus ENSEEUG00000006618 N 0.000
ZNF606 Homo sapiens ENSG00000166704 N 0.000
ZNF606 Gorilla gorilla ENSGGOG00000010665 N 0.000
ZNF606 Loxodonta africana ENSLAFG00000008695 N 0.000
ZNF606 Microcebus murinus ENSMICG00000005012 N 0.000
ZNF606 Macaca mulatta ENSMMUG00000020495 N 0.000
ENSMPUG00000008423 Mustela putorius furo ENSMPUG00000008423 N 0.000
Zfp606 Mus musculus ENSMUSG00000030386 N 0.000
ENSNLEG00000011055 Nomascus leucogenys ENSNLEG00000011055 N 0.000
ZNF606 Otolemur garnettii ENSOGAG00000009299 N 0.000
ENSP00000343617 Macaca fascicularis ENSP00000343617 N 0.000
ENSPANG00000010429 Papio anubis ENSPANG00000010429 N 0.000
ENSPCAG00000000009 Procavia capensis ENSPCAG00000000009 N 0.000
ENSPPYG00000010488 Pongo abelii ENSPPYG00000010488 N 0.000
ZNF606 Pan troglodytes ENSPTRG00000011575 N 0.000
Zfp606 Rattus norvegicus ENSRNOG00000019127 N 0.000
ZNF606 Sus scrofa ENSSSCG00000003995 N 0.000
ZNF606 Tursiops truncatus ENSTTRG00000017225 N 0.000