CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART01G41100
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART01G41100
T124619_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G41100.1
C2H2 ZF
1167
1189
YSCDIEGCSMSFRTKRDLSLHKS
OBART01G41100.1
C2H2 ZF
1191
1214
ICPVKGCGKKFFSHKYLLQHRKVH
OBART01G41100.1
C2H2 ZF
1250
1276
YVCHEPGCAQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_05290
Beauveria bassiana
BBA_05290
N
CCM_03567
Cordyceps militaris
CCM_03567
N
CFIO01_04640
Colletotrichum fioriniae
CFIO01_04640
N
CGGC5_12360
Colletotrichum gloeosporioides
CGGC5_12360
N
Cob_06772
Colletotrichum orbiculare
Cob_06772
N
CSUB01_08287
Colletotrichum sublineola
CSUB01_08287
N
e_gw1.1.1456.1
Nectria haematococca
e_gw1.1.1456.1
N
e_gw1.3.1319.1
Nectria haematococca
e_gw1.3.1319.1
N
FFUJ_00526
Fusarium fujikuroi
FFUJ_00526
N
FGRRES_00713
Fusarium graminearum
FGRRES_00713
N
FPSE_00326
Fusarium pseudograminearum
FPSE_00326
N
GLRG_10465
Colletotrichum graminicola
GLRG_10465
N
NechaG30904
Fusarium solani
NechaG30904
N
TRIVIDRAFT_114321
Trichoderma virens
TRIVIDRAFT_114321
N