CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART02G20190
(
Oryza barthii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
OBART02G20190
T124623_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART02G20190.1
C2H2 ZF
64
88
FLCSYEGCGKTFVDAGALRKHAHVH
OBART02G20190.1
C2H2 ZF
93
117
YVCHYAGCDKKFLDSSKLKRHFLIH
OBART02G20190.1
C2H2 ZF
123
147
FVCPHEGCGKAFSLDFNLKAHMKTH
OBART02G20190.1
C2H2 ZF
153
178
HVCKYPECARRFTQESKLRAHIKQQH
OBART02G20190.1
C2H2 ZF
221
246
YVCPYDGCAKAYIHEYKLNLHLKKEH
Links
Other
C2H2 ZF
family TFs
Other
Oryza barthii
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG18262
Drosophila melanogaster
FBgn0030012
N
GF21309
Drosophila ananassae
FBgn0098311
N
GG19300
Drosophila erecta
FBgn0111504
N
GH24100
Drosophila grimshawi
FBgn0131556
N
GI14369
Drosophila mojavensis
FBgn0137121
N
GL20363
Drosophila persimilis
FBgn0157958
N
GJ19409
Drosophila virilis
FBgn0206552
N
GE15767
Drosophila yakuba
FBgn0233332
N
GA29018
Drosophila pseudoobscura
FBgn0250376
N