OBART08G17550 (Oryza barthii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OBART08G17550 T124652_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.759 0.905
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.759 0.905
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART08G17550.1 C2H2 ZF 143 164
OBART08G17550.1 C2H2 ZF 164 189

Links

Other C2H2 ZF family TFs
Other Oryza barthii TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006438 Ailuropoda melanoleuca ENSAMEG00000006438 N
ENSBTAG00000008911 Bos taurus ENSBTAG00000008911 N
ENSBTAG00000031523 Bos taurus ENSBTAG00000031523 N
ZXDC Canis familiaris ENSCAFG00000003826 N
ENSCAFG00000016517 Canis familiaris ENSCAFG00000016517 N
ENSCJAG00000003009 Callithrix jacchus ENSCJAG00000003009 N
ZXDC Cavia porcellus ENSCPOG00000002150 N
ENSCPOG00000005007 Cavia porcellus ENSCPOG00000005007 N
ENSCSAG00000008075 Chlorocebus sabaeus ENSCSAG00000008075 N
ENSCSAG00000019499 Chlorocebus sabaeus ENSCSAG00000019499 N
ENSDNOG00000007340 Dasypus novemcinctus ENSDNOG00000007340 N
ENSFCAG00000005774 Felis catus ENSFCAG00000005774 N
ZXDC Homo sapiens ENSG00000070476 N
ZXDA Homo sapiens ENSG00000198205 N
ZXDB Homo sapiens ENSG00000198455 N
ZXDC Gorilla gorilla ENSGGOG00000009938 N
ZXDB Gorilla gorilla ENSGGOG00000011651 N
ZXDA Gorilla gorilla ENSGGOG00000024746 N
ENSLAFG00000017963 Loxodonta africana ENSLAFG00000017963 N
ENSMICG00000009255 Microcebus murinus ENSMICG00000009255 N
ENSMMUG00000004920 Macaca mulatta ENSMMUG00000004920 N
ZXDA Macaca mulatta ENSMMUG00000019432 N
ENSMPUG00000015900 Mustela putorius furo ENSMPUG00000015900 N
ENSMPUG00000017379 Mustela putorius furo ENSMPUG00000017379 N
ENSMPUG00000019780 Mustela putorius furo ENSMPUG00000019780 N
ENSNLEG00000001066 Nomascus leucogenys ENSNLEG00000001066 N
ENSOARG00000004624 Ovis aries ENSOARG00000004624 N
ENSOARG00000005360 Ovis aries ENSOARG00000005360 N
ENSOCUG00000003505 Oryctolagus cuniculus ENSOCUG00000003505 N
ENSOGAG00000009487 Otolemur garnettii ENSOGAG00000009487 N
ENSOGAG00000025034 Otolemur garnettii ENSOGAG00000025034 N
ZXDC Otolemur garnettii ENSOGAG00000028511 N
ENSP00000351530 Macaca fascicularis ENSP00000351530 N
ENSP00000351530-D2 Bos grunniens ENSP00000351530-D2 N
ENSP00000364023 Macaca fascicularis ENSP00000364023 N
ENSP00000364023-D1 Bos grunniens ENSP00000364023-D1 N
ENSPANG00000000433 Papio anubis ENSPANG00000000433 N
ENSPANG00000023784 Papio anubis ENSPANG00000023784 N
ENSPCAG00000012425 Procavia capensis ENSPCAG00000012425 N
ENSPPYG00000013453 Pongo abelii ENSPPYG00000013453 N
ENSPPYG00000020407 Pongo abelii ENSPPYG00000020407 N
ENSPPYG00000020408 Pongo abelii ENSPPYG00000020408 N
ZXDC Pan troglodytes ENSPTRG00000015332 N
ZXDA Pan troglodytes ENSPTRG00000021962 N
ZXDB Pan troglodytes ENSPTRG00000028265 N
ENSSARG00000007588 Sorex araneus ENSSARG00000007588 N
ENSSSCG00000012359 Sus scrofa ENSSSCG00000012359 N
ENSSTOG00000021364 Ictidomys tridecemlineatus ENSSTOG00000021364 N
ENSTBEG00000001799 Tupaia belangeri ENSTBEG00000001799 N
ENSTSYG00000007412 Tarsius syrichta ENSTSYG00000007412 N
ENSTTRG00000004499 Tursiops truncatus ENSTTRG00000004499 N