OGLUM08G18370 (Oryza glumaepatula)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 OGLUM08G18370 T124743_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.759 0.905
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.759 0.905
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM08G18370.1 C2H2 ZF 143 164
OGLUM08G18370.1 C2H2 ZF 164 189

Links

Other C2H2 ZF family TFs
Other Oryza glumaepatula TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
21379_Multiple Saccharomyces bayanus 21379_Multiple I
ZBAI_02093 Zygosaccharomyces bailii ZBAI_02093 N
ZBAI_07949 Zygosaccharomyces bailii ZBAI_07949 N
ZYRO0A03300g Zygosaccharomyces rouxii ZYRO0A03300g N