CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFICI_05888
(
Pestalotiopsis fici
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PFICI_05888
T125739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.822
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETS84012
C2H2 ZF
35
57
YKCQFCARAFSRSEHRSRHERSH
ETS84012
C2H2 ZF
63
86
FKCMKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Pestalotiopsis fici
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy