CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-ces-1
(
Pristionchus pacificus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PPA01396
T126971_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA01396
C2H2 ZF
166
188
CVCDECGKSYATASNLSRHKQTH
PPA01396
C2H2 ZF
197
213
KKCPHCDRVYVSMPALR
Links
Other
C2H2 ZF
family TFs
Other
Pristionchus pacificus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_03102
Ancylostoma caninum
ANCCAN_03102
N
0.767
ANCDUO_06968
Ancylostoma duodenale
ANCDUO_06968
N
0.767
OESDEN_09197
Oesophagostomum dentatum
OESDEN_09197
N
0.767
scaffold41-EXSNAP2012.30
Pristionchus exspectatus
scaffold41-EXSNAP2012.30
N
0.807