CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PV09_03275
(
Verruconis gallopava
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV09_03275
T127614_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05285
M01885_2.00
Neurospora crassa
NNNVYCCRC
GYGGRBNNN
PBM
Weirauch et al.(2014)
pTH8892
0.788
0.889
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIW06107
C2H2 ZF
180
202
FPCPHCTKTYLHAKHLKRHMLRH
KIW06107
C2H2 ZF
208
229
YQCKLCKDTFSRSDILKRHFQK
Links
Other
C2H2 ZF
family TFs
Other
Verruconis gallopava
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000806701
Angiostrongylus costaricensis
ACOC_0000806701
N
ANCCAN_00760
Ancylostoma caninum
ANCCAN_00760
N
ANCCEY_01923
Ancylostoma ceylanicum
ANCCEY_01923
N
DICVIV_00307
Dictyocaulus viviparus
DICVIV_00307
N
HCOI01584500
Haemonchus contortus
HCOI01584500
N
HPBE_0000909401
Heligmosomoides bakeri
HPBE_0000909401
N
HPLM_0000746201
Haemonchus placei
HPLM_0000746201
N
TELCIR_12719
Teladorsagia circumcincta
TELCIR_12719
N
TELCIR_20092
Teladorsagia circumcincta
TELCIR_20092
N