CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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S40285_00403
(
Stachybotrys chlorohalonata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
S40285_00403
T128075_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06503
M01888_2.00
Neurospora crassa
NNCCCCDCNN
NNGHGGGGNN
PBM
Weirauch et al.(2014)
pTH8898
0.822
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KFA63515
C2H2 ZF
30
52
YKCQFCNRAFSRSEHRSRHERSH
KFA63515
C2H2 ZF
58
81
FKCMKCRSTFVRRDLLLRHDRTVH
Links
Other
C2H2 ZF
family TFs
Other
Stachybotrys chlorohalonata
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_02365
Phytophthora parasitica
F443_02365
N
F443_02366
Phytophthora parasitica
F443_02366
N
fgenesh-pir_contig_1013-abinit-gene-0.11
Pythium irregulare
fgenesh-pir_contig_1013-abinit-gene-0.11
N
fgenesh_scip_prom.28083.3870
Phytophthora lateralis
fgenesh_scip_prom.28083.3870
N
fgenesh_scip_prom.46568.4280
Phytophthora kernoviae
fgenesh_scip_prom.46568.4280
N
gw1.23.237.1
Phytophthora capsici
gw1.23.237.1
N
maker-par_contig_6341-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6341-snap-gene-0.1
N
maker-par_contig_6510-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_6510-snap-gene-0.1
N
maker-pir_contig_1013-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_1013-fgenesh-gene-0.0
N
maker-pir_contig_87-fgenesh-gene-0.17
Pythium irregulare
maker-pir_contig_87-fgenesh-gene-0.17
N
maker-piw_contig_165-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_165-snap-gene-0.13
N
maker-piw_contig_1851-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_1851-snap-gene-0.3
N
maker-pve_contig_476-snap-gene-0.24
Pythium vexans
maker-pve_contig_476-snap-gene-0.24
N
Phyra93994
Phytophthora ramorum
Phyra93994
N
Physo134087
Phytophthora sojae
Physo134087
N
Physo143269
Phytophthora sojae
Physo143269
N
Physo143270
Phytophthora sojae
Physo143270
N
PITG_12840
Phytophthora infestans
PITG_12840
N
PITG_12841
Phytophthora infestans
PITG_12841
N
PYU1_G007782
Pythium ultimum
PYU1_G007782
N
PYU1_G008786
Pythium ultimum
PYU1_G008786
N