AZF3 (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 scaffold_800768.1 T128322_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.816 0.889
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.809 0.844
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.809 0.844
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.809 0.844
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.792 0.800
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.780 0.822
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.780 0.822
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.769 0.689
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.769 0.644
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_800768.1 C2H2 ZF 74 95
scaffold_800768.1 C2H2 ZF 116 138

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001925 Aedes aegypti AAEL001925 N
AALB005658 Anopheles albimanus AALB005658 N
AARA007828 Anopheles arabiensis AARA007828 N
AATE002182 Anopheles atroparvus AATE002182 N
ACEP16593 Atta cephalotes ACEP16593 N
ACHR006701 Anopheles christyi ACHR006701 N
ACOM025371 Anopheles coluzzii ACOM025371 N
ACYPI001044 Acyrthosiphon pisum ACYPI001044 N
ADIR007954 Anopheles dirus ADIR007954 N
AEPI005047 Anopheles epiroticus AEPI005047 N
AFAF017055 Anopheles farauti AFAF017055 N
AFUN003930 Anopheles funestus AFUN003930 N
AGAP007178 Anopheles gambiae AGAP007178 N
AMEC019779 Anopheles melas AMEC019779 N
AMEM017655 Anopheles merus AMEM017655 N
AMIN010644 Anopheles minimus AMIN010644 N
AQUA002099 Anopheles quadriannulatus AQUA002099 N
ASIS021701 Anopheles sinensis ASIS021701 N
ASTEI02720 Anopheles stephensi ASTEI02720 N
BGIBMGA012698 Bombyx mori BGIBMGA012698 N
Cflo_07298--XP_396330.3_APIME Camponotus floridanus Cflo_07298--XP_396330.3_APIME N
CLEC006839 Cimex lectularius CLEC006839 N
CPIJ009909 Culex quinquefasciatus CPIJ009909 N
CpipJ_CPIJ009909 Culex pipiens CpipJ_CPIJ009909 N
GF10235 Drosophila ananassae FBgn0087276 N
GG14496 Drosophila erecta FBgn0106755 N
GH14579 Drosophila grimshawi FBgn0122055 N
GH22490 Drosophila grimshawi FBgn0129948 N
GI13904 Drosophila mojavensis FBgn0136658 N
GL22430 Drosophila persimilis FBgn0160022 N
GM14099 Drosophila sechellia FBgn0169028 N
GD13370 Drosophila simulans FBgn0185084 N
GJ11760 Drosophila virilis FBgn0199014 N
GK17628 Drosophila willistoni FBgn0219627 N
GE21684 Drosophila yakuba FBgn0238932 N
GA28320 Drosophila pseudoobscura FBgn0249682 N
Tet Drosophila melanogaster FBgn0263392 N
GB52555 Apis mellifera GB52555 N
HHAL006470-PA Halyomorpha halys HHAL006470-PA N
HMEL013359 Heliconius melpomene HMEL013359 N
Hsal_06375--XP_396330.3_APIME Harpegnathos saltator Hsal_06375--XP_396330.3_APIME N
ISCW023645 Ixodes scapularis ISCW023645 N
KGM_05165 Danaus plexippus KGM_05165 N
L798_15814 Zootermopsis nevadensis L798_15814 N
LCUP015162 Lucilia cuprina LCUP015162 N
LDEC020316 Leptinotarsa decemlineata LDEC020316 N
MDOA007787 Musca domestica MDOA007787 N
MESCA007735 Megaselia scalaris MESCA007735 N
NV14212 Nasonia vitripennis NV14212 N
PHUM058930 Pediculus humanus PHUM058930 N
RPRC001841 Rhodnius prolixus RPRC001841 N
SINV21580 Solenopsis invicta SINV21580 N
TC013796 Tribolium castaneum TC013796 N
YQE_04891 Dendroctonus ponderosae YQE_04891 N