Si037672m.g (Setaria italica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Si037672m.g T128712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.786 0.761
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.786 0.761
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.785 0.717
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si037672m C2H2 ZF 60 87
Si037672m C2H2 ZF 121 143

Links

Other C2H2 ZF family TFs
Other Setaria italica TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_05586 Ancylostoma caninum ANCCAN_05586 N 0.000
CBG21083 Caenorhabditis briggsae CBG21083 N 0.000
NBR_0001149301 Nippostrongylus brasiliensis NBR_0001149301 N 0.000
SVUK_0000060801 Strongylus vulgaris SVUK_0000060801 N 0.000