SKUD_139603 (Saccharomyces kudriavzevii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SKUD_139603 T128947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MET31
M00040_2.00 		Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN		 PBM
Badis et al.(2008)
MET31_2146 		0.827 0.978
MET31
M07470_2.00 		Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1 		0.827 0.978
MET31
M08543_2.00 		Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB		 Misc
DeBoer et al.(2011)
YPL038W_1370 		0.827 0.978
MET31
M10402_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MET31_01 		0.827 0.978
MET32
M00022_2.00 		Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN		 PBM
Badis et al.(2008)
MET32_2153 		0.773 0.778
MET32
M01528_2.00 		Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK		 PBM
Zhu et al.(2009)
Met32 		0.773 0.778
MET32
M07452_2.00 		Saccharomyces cerevisiae
MGCCACM
KGTGGCK		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1 		0.773 0.778
MET32
M08518_2.00 		Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB		 Misc
DeBoer et al.(2011)
YDR253C_1375 		0.773 0.778
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42808 C2H2 ZF 89 111
EJT42808 C2H2 ZF 117 138

Links

Other C2H2 ZF family TFs
Other Saccharomyces kudriavzevii TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22143_YPL038W Saccharomyces mikatae 22143_YPL038W I 0.808
23564_YPL038W Saccharomyces paradoxus 23564_YPL038W I 0.827
25018_YPL038W Saccharomyces bayanus 25018_YPL038W I 0.827
3987_YDR253C Saccharomyces mikatae 3987_YDR253C I 0.773
4678_YDR253C Saccharomyces paradoxus 4678_YDR253C I 0.773
KAFR_0E02900 Kazachstania africana KAFR_0E02900 I 0.758
KLLA0_D11902g Kluyveromyces lactis KLLA0_D11902g I 0.757
KLTH0E11330g Lachancea thermotolerans KLTH0E11330g I 0.763
KLTH0E11330g Kluyveromyces thermotolerans KLTH0E11330g I 0.763
KNAG_0A04030 Kazachstania naganishii KNAG_0A04030 I 0.757
Kwal_11824 Kluyveromyces waltii Kwal_11824 I 0.768
LALA0_S04e04720g Lachancea lanzarotensis LALA0_S04e04720g I 0.763
NCAS_0B02480 Naumovozyma castellii NCAS_0B02480 I 0.763
NCAS_0C02430 Naumovozyma castellii NCAS_0C02430 I 0.782
NDAI_0C05210 Naumovozyma dairenensis NDAI_0C05210 I 0.776
SAKL0H11440g Lachancea kluyveri SAKL0H11440g I 0.763
Scas_Contig568.5 Saccharomyces castellii Scas_Contig568.5 I 0.782
Scas_Contig721.56 Saccharomyces castellii Scas_Contig721.56 I 0.763
SKUD_191509 Saccharomyces kudriavzevii SKUD_191509 I 0.773
SU7_3598 Saccharomyces arboricola SU7_3598 I 0.827
TBLA_0A00350 Tetrapisispora blattae TBLA_0A00350 I 0.761
TDEL_0B01500 Torulaspora delbrueckii TDEL_0B01500 I 0.767
TPHA_0L01320 Tetrapisispora phaffii TPHA_0L01320 I 0.761
MET32 Saccharomyces cerevisiae YDR253C D 0.773
MET31 Saccharomyces cerevisiae YPL038W D 0.827
ZBAI_00597 Zygosaccharomyces bailii ZBAI_00597 I 0.768
ZBAI_05898 Zygosaccharomyces bailii ZBAI_05898 I 0.768
ZYRO0F08162g Zygosaccharomyces rouxii ZYRO0F08162g I 0.768