CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMAC_05322
(
Sordaria macrospora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SMAC_05322
T128989_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.824
0.986
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.824
0.986
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.786
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC12250
C2H2 ZF
419
444
YVCKFQGCNAAPFQTQYLLNSHANVH
CCC12250
C2H2 ZF
450
479
HYCSVPGCSRGEGGRGFKRKNEMIRHGLVH
CCC12250
C2H2 ZF
484
510
YVCPFCPDREHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Sordaria macrospora
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_030900
Aspergillus clavatus
CADACLAG00003026
N
CADAFLAG00002223
Aspergillus flavus
CADAFLAG00002223
N
CADANGAG00014038
Aspergillus niger
CADANGAG00014038
N
ANIA_04021
Aspergillus nidulans
CADANIAG00004663
N
ATEG_03838
Aspergillus terreus
CADATEAG00008913
N
EURHEDRAFT_457871
Aspergillus ruber
EURHEDRAFT_457871
N
fgenesh1_pg.00129_#_179
Aspergillus carbonarius
fgenesh1_pg.00129_#_179
N
H101_04716
Trichophyton interdigitale
H101_04716
N
H102_03391
Trichophyton rubrum
H102_03391
N
H105_03409
Trichophyton soudanense
H105_03409
N
MCYG_05803
Microsporum canis
MCYG_05803
N
MGYG_02906
Microsporum gypseum
MGYG_02906
N
PMAA_055260
Talaromyces marneffei
PMAA_055260
N
PMAA_055260
Penicillium marneffei
PMAA_055260
N
TEQG_00827
Trichophyton equinum
TEQG_00827
N
TESG_04726
Trichophyton tonsurans
TESG_04726
N
TSTA_017610
Talaromyces stipitatus
TSTA_017610
N
Z518_10731
Rhinocladiella mackenziei
Z518_10731
N