Solyc05g054650.1 (Solanum lycopersicum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Solyc05g054650.1 T129367_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.800 0.783
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.795 0.804
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN

NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.795 0.804
AT3G53600
M01856_2.00
Arabidopsis thaliana
NNHASWN

NWSTDNN
PBM
Weirauch et al.(2014)
pTH7188
0.786 0.783
AT3G53600
M00858_2.00
Arabidopsis thaliana
NNNNRSWN

NWSYNNNN
PBM
Franco-Zorrilla et al.(2014)
ZAT18
0.786 0.783
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN

NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.774 0.696
ZAT7
M01855_2.00
Arabidopsis thaliana
NVDBRCACTNNNN

NNNNAGTGYVHBN
PBM
Weirauch et al.(2014)
pTH7540
0.771 0.804
AT3G46070
M06813_2.00
Arabidopsis thaliana
HYHHYHTCACTYHHH

DDDRAGTGADRDDRD
Dap-seq
OMalley et al.(2016)
AT3G46070_col_a
0.763 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g054650.1.1 C2H2 ZF 27 49
Solyc05g054650.1.1 C2H2 ZF 72 94

Links

Other C2H2 ZF family TFs
Other Solanum lycopersicum TFs

391 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_00464 Capronia coronata A1O1_00464 N 0.000
A1O1_02535 Capronia coronata A1O1_02535 N 0.000
CADAFLAG00003334 Aspergillus flavus CADAFLAG00003334 N 0.000
ANIA_01584 Aspergillus nidulans CADANIAG00008217 N 0.000
ATEG_06092 Aspergillus terreus CADATEAG00000839 N 0.000
CFIO01_01654 Colletotrichum fioriniae CFIO01_01654 N 0.000
CIMG_02802 Coccidioides immitis CIMG_02802 N 0.000
CPC735_036320 Coccidioides posadasii CPC735_036320 N 0.000
EURHEDRAFT_415639 Aspergillus ruber EURHEDRAFT_415639 N 0.000
F503_03308 Ophiostoma piceae uamh F503_03308 N 0.000
FFUJ_11117 Fusarium fujikuroi FFUJ_11117 N 0.000
fgenesh1_pg.sca_28_chr13_5_0000057 Nectria haematococca fgenesh1_pg.sca_28_chr13_5_0000057 N 0.000
fgenesh1_pg.sca_32_chr11_3_0000153 Nectria haematococca fgenesh1_pg.sca_32_chr11_3_0000153 N 0.000
FGRRES_03102 Fusarium graminearum FGRRES_03102 N 0.000
FPSE_02123 Fusarium pseudograminearum FPSE_02123 N 0.000
HMPREF1120_04953 Exophiala dermatitidis HMPREF1120_04953 N 0.000
HMPREF1120_05596 Exophiala dermatitidis HMPREF1120_05596 I 0.000
HMPREF1624_03990 Sporothrix schenckii HMPREF1624_03990 N 0.000
KUCA_T00000009001 Kuraishia capsulata KUCA_T00000009001 N 0.000
KUCA_T00000013001 Kuraishia capsulata KUCA_T00000013001 N 0.000
KUCA_T00003117001 Kuraishia capsulata KUCA_T00003117001 N 0.000
KUCA_T00003996001 Kuraishia capsulata KUCA_T00003996001 N 0.000
KUCA_T00004747001 Kuraishia capsulata KUCA_T00004747001 N 0.000
KUCA_T00005495001 Kuraishia capsulata KUCA_T00005495001 N 0.000
MAC_06969 Metarhizium acridum MAC_06969 N 0.000
MAJ_08159 Metarhizium majus MAJ_08159 N 0.000
MBR_08966 Metarhizium brunneum MBR_08966 N 0.000
MGG_14816 Magnaporthe oryzae MGG_14816 N 0.000
MGU_09044 Metarhizium guizhouense MGU_09044 N 0.000
NechaG86758 Fusarium solani NechaG86758 N 0.000
NechaG88155 Fusarium solani NechaG88155 N 0.000
Pc13g03330 Penicillium chrysogenum Pc13g03330 N 0.000
PCH_Pc13g03330 Penicillium rubens PCH_Pc13g03330 N 0.000
PDE_06660 Penicillium oxalicum PDE_06660 N 0.000
PEX1_062920 Penicillium expansum PEX1_062920 N 0.000
PFICI_00049 Pestalotiopsis fici PFICI_00049 N 0.000
PV04_07764 Capronia semiimmersa PV04_07764 N 0.000
PV06_11257 Exophiala oligosperma PV06_11257 N 0.000
PV06_11661 Exophiala oligosperma PV06_11661 N 0.000
PV06_11680 Exophiala oligosperma PV06_11680 N 0.000
U727_00432581551 Penicillium solitum U727_00432581551 N 0.000
VDBG_09586 Verticillium alfalfae VDBG_09586 N 0.000
VDBG_09586 Verticillium albo atrum VDBG_09586 N 0.000
VHEMI00089 Torrubiella hemipterigena VHEMI00089 N 0.000