TC003000 (Tribolium castaneum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TC003000 T129953_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ci
M03672_2.00 		Drosophila melanogaster
NCGMCCACMN
NKGTGGKCGN		 SELEX
Nitta et al.(2015)
ci_1 		0.812 0.930
ci
M06084_2.00 		Drosophila melanogaster
RGMCCACMCAC
GTGKGTGGKCY		 B1H
Zhu et al.(2011)
Ci_SANGER_5_FBgn0004859 		0.812 0.930
ci
M02644_2.00 		Drosophila melanogaster
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
Ci 		0.812 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC003000-PA C2H2 ZF 317 342
TC003000-PA C2H2 ZF 350 377
TC003000-PA C2H2 ZF 383 407
TC003000-PA C2H2 ZF 413 438
TC003000-PA C2H2 ZF 444 469

Links

Other C2H2 ZF family TFs
Other Tribolium castaneum TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001723901 Ascaris lumbricoides ALUE_0001723901 N
ASU_11495 Ascaris suum ASU_11495 N
BGLB006871 Biomphalaria glabrata BGLB006871 I
Bm5997 Brugia malayi Bm5997 N
BXY_1725100 Bursaphelenchus xylophilus BXY_1725100 N
CapteG178526 Capitella teleta CapteG178526 I
DME_0000120101 Dracunculus medinensis DME_0000120101 N
EEL_0000136901 Elaeophora elaphi EEL_0000136901 N
GPLIN_000092900 Globodera pallida GPLIN_000092900 N
GPUH_0001488401 Gongylonema pulchrum GPUH_0001488401 N
HelroG173259 Helobdella robusta HelroG173259 N
L596_g21776 Steinernema carpocapsae L596_g21776 N
L889_g29315 Steinernema feltiae L889_g29315 N
L892_g23905 Steinernema scapterisci L892_g23905 N
L893_g25726 Steinernema glaseri L893_g25726 N
L898_g22792 Steinernema monticolum L898_g22792 N
LotgiG79422 Lottia gigantea LotgiG79422 I
maker-nMf.1.1.scaf01889-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf01889-snap-gene-0.8 N
Minc09684 Meloidogyne incognita Minc09684 N
nAv.1.0.1.g03257 Acanthocheilonema viteae nAv.1.0.1.g03257 N
nDi.2.2.2.g00486 Dirofilaria immitis nDi.2.2.2.g00486 N
nLs.2.1.2.g02189 Litomosoides sigmodontis nLs.2.1.2.g02189 N
nOo.2.0.1.g03644 Onchocerca ochengi nOo.2.0.1.g03644 N
Ocbimv22005044m.g Octopus bimaculoides Ocbimv22005044m.g I
PTRK_0001642900 Parastrongyloides trichosuri PTRK_0001642900 N
RPRC014918 Rhodnius prolixus RPRC014918 I
SPAL_0001132900 Strongyloides papillosus SPAL_0001132900 I
SSTP_0000472400 Strongyloides stercoralis SSTP_0000472400 I
SVE_0118900 Strongyloides venezuelensis SVE_0118900 I
WBGene00247331 Onchocerca volvulus WBGene00247331 N
WUBG_03870 Wuchereria bancrofti WUBG_03870 N