TCM_039880 (Theobroma cacao)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 TCM_039880 T130201_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.811 0.932
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.811 0.932
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY32245 C2H2 ZF 133 154
EOY32245 C2H2 ZF 154 182

Links

Other C2H2 ZF family TFs
Other Theobroma cacao TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
12664_YJR127C Saccharomyces mikatae 12664_YJR127C I
12764_Multiple Saccharomyces paradoxus 12764_Multiple I
13784_YJR127C Saccharomyces bayanus 13784_YJR127C I
16099_Multiple Saccharomyces mikatae 16099_Multiple I
17638_YML081W Saccharomyces paradoxus 17638_YML081W I
18114_YML081W Saccharomyces bayanus 18114_YML081W I
AACERI_AaceriAER159C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAER159C I
AGOS_AER159C Ashbya gossypii AGOS_AER159C I
CAGL0H04213g Candida glabrata CAGL0H04213g I
KAFR_0B06810 Kazachstania africana KAFR_0B06810 I
KAFR_0E04270 Kazachstania africana KAFR_0E04270 I
KLLA0_B04477g Kluyveromyces lactis KLLA0_B04477g I
KLTH0D18062g Kluyveromyces thermotolerans KLTH0D18062g I
KLTH0D18062g Lachancea thermotolerans KLTH0D18062g I
KNAG_0M00350 Kazachstania naganishii KNAG_0M00350 I
Kwal_16621 Kluyveromyces waltii Kwal_16621 I
LALA0_S08e05644g Lachancea lanzarotensis LALA0_S08e05644g I
NCAS_0A06250 Naumovozyma castellii NCAS_0A06250 I
NDAI_0D03240 Naumovozyma dairenensis NDAI_0D03240 I
NDAI_0J02850 Naumovozyma dairenensis NDAI_0J02850 I
SAKL0G18062g Lachancea kluyveri SAKL0G18062g I
Scas_Contig703.23 Saccharomyces castellii Scas_Contig703.23 I
SU7_2441 Saccharomyces arboricola SU7_2441 I
TBLA_0B06160 Tetrapisispora blattae TBLA_0B06160 I
TBLA_0E04770 Tetrapisispora blattae TBLA_0E04770 I
TDEL_0D00670 Torulaspora delbrueckii TDEL_0D00670 I
TPHA_0B00380 Tetrapisispora phaffii TPHA_0B00380 I
RSF2 Saccharomyces cerevisiae YJR127C D
TDA9 Saccharomyces cerevisiae YML081W D
ZBAI_03167 Zygosaccharomyces bailii ZBAI_03167 I
ZBAI_03168 Zygosaccharomyces bailii ZBAI_03168 I
ZBAI_08875 Zygosaccharomyces bailii ZBAI_08875 I
ZYRO0B14894g Zygosaccharomyces rouxii ZYRO0B14894g I