CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TPHA_0C02580
(
Tetrapisispora phaffii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TPHA_0C02580
T130501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KLLA0_F26961g
M01039_2.00
Kluyveromyces lactis
CYCCYTD
HARGGRG
PBM
Siggers et al.(2014)
KLLA0F29691gKlac
0.816
0.804
MSN4
M00032_2.00
Saccharomyces cerevisiae
NYCCCYNN
NNRGGGRN
PBM
Badis et al.(2008)
MSN4_2121
0.787
0.826
MSN4
M07462_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0342.1
0.787
0.826
MSN4
M08533_2.00
Saccharomyces cerevisiae
CCCCT
AGGGG
Misc
DeBoer et al.(2011)
YKL062W_518
0.787
0.826
CAGL0M13189g
M01034_2.00
Candida glabrata
MYCCBBDNN
NNHVVGGRK
PBM
Siggers et al.(2014)
CAGL0M13189gCgla
0.763
0.761
CAGL0F05995g
M01032_2.00
Candida glabrata
NYCCYYNN
NNRRGGRN
PBM
Siggers et al.(2014)
CAGL0F05995gCgla
0.757
0.739
MSN2
M00036_2.00
Saccharomyces cerevisiae
NVCCCCTK
MAGGGGBN
PBM
Badis et al.(2008)
MSN2_2101
0.757
0.717
MSN2
M07466_2.00
Saccharomyces cerevisiae
CCCCY
RGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0341.1
0.757
0.717
MSN2
M08538_2.00
Saccharomyces cerevisiae
NHYCCKN
NMGGRDN
Misc
DeBoer et al.(2011)
YMR037C_1380
0.757
0.717
MSN2
M10399_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MSN2_Q4
0.757
0.717
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCE62411
C2H2 ZF
308
331
FKCNKCEKKFKRSEHLKRHIRSVH
CCE62411
C2H2 ZF
337
359
YHCQFCEKNFSRSDNLSQHLKTH
Links
Other
C2H2 ZF
family TFs
Other
Tetrapisispora phaffii
TFs
57 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NFIA_099790
Neosartorya fischeri
CADNFIAG00008916
N
fgenesh1_pg.C_scaffold_9000152
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_9000152
N
M422DRAFT_38534
Sphaerobolus stellatus
M422DRAFT_38534
I
PHACADRAFT_261296
Phanerochaete carnosa
PHACADRAFT_261296
N
POSPLDRAFT_104357
Postia placenta
POSPLDRAFT_104357
N
PV10_07678
Exophiala mesophila
PV10_07678
N