CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TRIATDRAFT_295810
(
Trichoderma atroviride
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
TRIATDRAFT_295810
T130716_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01122
M01872_2.00
Neurospora crassa
NHCCCRC
GYGGGDN
PBM
Weirauch et al.(2014)
pTH8915
0.756
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EHK42075
C2H2 ZF
117
141
FVCDHAGCDKIYSRAEHLQRHQLNH
EHK42075
C2H2 ZF
147
171
YRCDVGDCDQKFVRLDLLSRHKKRH
Links
Other
C2H2 ZF
family TFs
Other
Trichoderma atroviride
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_11321
Colletotrichum fioriniae
CFIO01_11321
I
CGGC5_3935
Colletotrichum gloeosporioides
CGGC5_3935
I
CSUB01_03365
Colletotrichum sublineola
CSUB01_03365
I
estExt_fgenesh1_pg.C_40194
Cryphonectria parasitica
estExt_fgenesh1_pg.C_40194
I
estExt_Genewise1Plus.C_41610
Neurospora discreta
estExt_Genewise1Plus.C_41610
I
F503_03587
Ophiostoma piceae uamh
F503_03587
I
NCU00694
Neurospora crassa
NCU00694
D
NEUTE1DRAFT_132720
Neurospora tetrasperma
NEUTE1DRAFT_132720
I
PODANS_1_18880
Podospora anserina
PODANS_1_18880
I
SMAC_01368
Sordaria macrospora
SMAC_01368
I