CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_00166
(
Verticillium alfalfae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
VDBG_00166
T131357_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY14059
C2H2 ZF
241
265
YRCPYDGCPKSFQQSTHLETHKRAH
EEY14059
C2H2 ZF
271
295
YKCEWHGCGRRFSQPGNLKTHTRLH
EEY14059
C2H2 ZF
301
323
FECEMCGACFAQRGNLTAHKATH
EEY14059
C2H2 ZF
329
354
FVCKLDTCNKCFTTRGNLKNHQNKYH
Links
Other
C2H2 ZF
family TFs
Other
Verticillium alfalfae
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_08452
Verticillium dahliae
VDAG_08452
N
0.827
VDBG_00166
Verticillium albo atrum
VDBG_00166
N
0.827