CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VHEMI04457
(
Torrubiella hemipterigena
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
VHEMI04457
T131408_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CEJ87576
C2H2 ZF
478
503
YTCTYHGCTLRFESPALLQKHKREGH
CEJ87576
C2H2 ZF
544
562
CQSIFSRPYDLTRHEDTIH
CEJ87576
C2H2 ZF
569
594
VRCDLCTEEKSFSRADALTRHYRVCH
Links
Other
C2H2 ZF
family TFs
Other
Torrubiella hemipterigena
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf03183-processed-gene-0.0
N
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07071-processed-gene-0.0
N
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf07814-processed-gene-0.0
N
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf08848-processed-gene-0.1
N
genemark-nMf.1.1.scaf00124-processed-gene-0.5
Meloidogyne floridensis
genemark-nMf.1.1.scaf00124-processed-gene-0.5
N
genemark-nMf.1.1.scaf29840-processed-gene-0.0
Meloidogyne floridensis
genemark-nMf.1.1.scaf29840-processed-gene-0.0
N
maker-nMf.1.1.scaf03855-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf03855-augustus-gene-0.7
N
maker-nMf.1.1.scaf04083-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf04083-augustus-gene-0.6
N
maker-nMf.1.1.scaf08489-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08489-snap-gene-0.4
N
maker-nMf.1.1.scaf08516-augustus-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf08516-augustus-gene-0.5
N
maker-nMf.1.1.scaf11243-snap-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf11243-snap-gene-0.6
N
MhA1_Contig311.frz3.gene3
Meloidogyne hapla
MhA1_Contig311.frz3.gene3
N
Minc02822
Meloidogyne incognita
Minc02822
N
Minc03112
Meloidogyne incognita
Minc03112
N
Minc03113
Meloidogyne incognita
Minc03113
N
Minc03116
Meloidogyne incognita
Minc03116
N
Minc03121
Meloidogyne incognita
Minc03121
N
Minc03122
Meloidogyne incognita
Minc03122
N
Minc03124
Meloidogyne incognita
Minc03124
N
Minc03125
Meloidogyne incognita
Minc03125
N
Minc03951
Meloidogyne incognita
Minc03951
N
Minc04628
Meloidogyne incognita
Minc04628
N
Minc04767
Meloidogyne incognita
Minc04767
N
Minc05938
Meloidogyne incognita
Minc05938
N
Minc05939
Meloidogyne incognita
Minc05939
N
Minc05941
Meloidogyne incognita
Minc05941
N
Minc05944
Meloidogyne incognita
Minc05944
N
Minc05946
Meloidogyne incognita
Minc05946
N
Minc05948
Meloidogyne incognita
Minc05948
N
Minc05949
Meloidogyne incognita
Minc05949
N
Minc05953
Meloidogyne incognita
Minc05953
N
Minc05954
Meloidogyne incognita
Minc05954
N
Minc05955
Meloidogyne incognita
Minc05955
N
Minc06648
Meloidogyne incognita
Minc06648
N
Minc06656
Meloidogyne incognita
Minc06656
N
Minc11357
Meloidogyne incognita
Minc11357
N
Minc11359
Meloidogyne incognita
Minc11359
N
Minc11361
Meloidogyne incognita
Minc11361
N
Minc11362
Meloidogyne incognita
Minc11362
N
Minc17472
Meloidogyne incognita
Minc17472
N
snap_masked-nMf.1.1.scaf05597-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf05597-processed-gene-0.2
N