M03D4.4 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00019751 T131634_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
M03D4.4
M00643_2.00		 Caenorhabditis elegans
NDTGCATGANN
NNTCATGCAHN		 PBM
Narasimhan et al.(2015)
pTH10027		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00643_2.00 C2H2 ZF 5 28
M00643_2.00 C2H2 ZF 88 110
M00643_2.00 C2H2 ZF 116 138
M00643_2.00 C2H2 ZF 144 166
M00643_2.00 C2H2 ZF 172 194
M00643_2.00 C2H2 ZF 199 220

DNA Binding Domains

Protein ID Domain From To Sequence
M03D4.4a C2H2 ZF 5 28
M03D4.4a C2H2 ZF 88 110
M03D4.4a C2H2 ZF 116 138
M03D4.4a C2H2 ZF 144 166
M03D4.4a C2H2 ZF 172 194
M03D4.4a C2H2 ZF 199 220
M03D4.4b C2H2 ZF 39 61
M03D4.4b C2H2 ZF 67 89
M03D4.4b C2H2 ZF 95 117
M03D4.4b C2H2 ZF 123 145
M03D4.4b C2H2 ZF 150 171

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G15123 Brachypodium distachyon BRADI1G15123 N
F775_04548 Aegilops tauschii F775_04548 N
F775_20808 Aegilops tauschii F775_20808 N
TRAES3BF267500040CFD_g Triticum aestivum TRAES3BF267500040CFD_g N
TRAES3BF267500050CFD_g Triticum aestivum TRAES3BF267500050CFD_g N
TRIUR3_06560 Triticum urartu TRIUR3_06560 N
TRIUR3_06561 Triticum urartu TRIUR3_06561 N