WBGene00237583 (Onchocerca volvulus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00237583 T131661_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.824 0.942
Sp1
M00765_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2013)
pTH0978 		0.766 0.768
SP1
M02921_2.00 		Homo sapiens
RCCMCDCCCMH
DKGGGHGKGGY		 SELEX
Jolma et al.(2013)
SP1_1 		0.766 0.768
SP1
M04605_2.00 		Homo sapiens
NWRRCCACGCCCMCH
DGKGGGCGTGGYYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_HT-SELEX 		0.766 0.768
SP1
M08096_2.00 		Homo sapiens
BYCCCKCCCCY
RGGGGMGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0079.3 		0.766 0.768
SP1
M08363_2.00 		Homo sapiens
CCCHNBCYCCDCCCY
RGGGHGGRGVNDGGG		 ChIP-seq
Schmitges et al.(2016)
P08047.MEME 		0.766 0.768
SP1
M08938_2.00 		Homo sapiens
BCSSSBCCHVGCCCCGCCCCYN
NRGGGGCGGGGCBDGGVSSSGV		 Misc
Kulakovskiy et al.(2013)
SP1_HUMAN.H11MO.0.A 		0.766 0.768
Sp1
M08963_2.00 		Mus musculus
CCCBKCYCCKCCCCCNBCYCSBSC
GSVSGRGVNGGGGGMGGRGMVGGG		 Misc
Kulakovskiy et al.(2013)
SP1_MOUSE.H11MO.0.A 		0.766 0.768
SP1
M10294_2.00 		Homo sapiens
DSCMHGCCYH
DRGGCDKGSH		 Transfac
Matys et al.(2006)
V$SP1_01 		0.766 0.768
SP1
M10295_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_02 		0.766 0.768
SP1
M10296_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_07 		0.766 0.768
SP1
M10297_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_08 		0.766 0.768
SP1
M10298_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q2_02 		0.766 0.768
SP1
M10299_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP1_Q3 		0.766 0.768
SP1
M10300_2.00 		Homo sapiens
VVCCCCGCCCMBN
NVKGGGCGGGGBB		 Transfac
Matys et al.(2006)
V$SP1_Q6 		0.766 0.768
SP1
M04606_2.00 		Homo sapiens
NWRGCCMCGCCCMYH
DRKGGGCGKGGCYWN		 SELEX
Yin et al.(2017)
SP1_eDBD_Methyl-HT-SELEX 		0.766 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OVOC774 C2H2 ZF 299 321
OVOC774 C2H2 ZF 327 351
OVOC774 C2H2 ZF 357 379

Links

Other C2H2 ZF family TFs
Other Onchocerca volvulus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07741 Capronia coronata A1O1_07741 N
A1O3_09950 Capronia epimyces A1O3_09950 N
A1O5_05391 Cladophialophora psammophila A1O5_05391 N
A1O7_06554 Cladophialophora yegresii A1O7_06554 N
A1O9_07672 Exophiala aquamarina A1O9_07672 N
CMQ_2329 Grosmannia clavigera CMQ_2329 N
F503_07098 Ophiostoma piceae uamh F503_07098 N
G647_05981 Cladophialophora carrionii G647_05981 N
HMPREF1120_03787 Exophiala dermatitidis HMPREF1120_03787 N
HMPREF1541_00735 Cyphellophora europaea HMPREF1541_00735 N
PFICI_00936 Pestalotiopsis fici PFICI_00936 N
PMAA_062410 Penicillium marneffei PMAA_062410 N
PMAA_062410 Talaromyces marneffei PMAA_062410 N
PV04_06957 Capronia semiimmersa PV04_06957 N
PV05_08275 Exophiala xenobiotica PV05_08275 N
PV06_01996 Exophiala oligosperma PV06_01996 N
PV07_03068 Cladophialophora immunda PV07_03068 N
PV08_02866 Exophiala spinifera PV08_02866 N
PV10_08334 Exophiala mesophila PV10_08334 N
PV11_06360 Exophiala sideris PV11_06360 N
Z518_05925 Rhinocladiella mackenziei Z518_05925 N
Z519_08265 Cladophialophora bantiana Z519_08265 N