CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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WBGene00238816
(
Onchocerca volvulus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
WBGene00238816
T131668_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.767
0.884
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OVOC2007
C2H2 ZF
184
206
YRCDICDKTFSRSNTLVTHKRIH
OVOC2007
C2H2 ZF
212
234
FNCDHCGRAFRQPGNLTRHRLTH
OVOC2007
C2H2 ZF
240
262
YICSICEKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Onchocerca volvulus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028184
Oryza indica
BGIOSGA028184
N
LPERR08G05670
Leersia perrieri
LPERR08G05670
N
OBART08G06050
Oryza barthii
OBART08G06050
N
OLONG_008033
Oryza longistaminata
OLONG_008033
N
OMERI08G06100
Oryza meridionalis
OMERI08G06100
N
ONIVA08G06110
Oryza nivara
ONIVA08G06110
N
ORUFI08G06820
Oryza rufipogon
ORUFI08G06820
N
OS08G0206700
Oryza sativa
OS08G0206700
N