CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG005180.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG005180.1
T133117_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG005180.1
C2H2 ZF
433
455
YTCIECSIYFKKKEHLMDHMLQH
Alligator_sinensis_CCG005180.1
C2H2 ZF
474
496
LCCNECGWAFGDLASLEQHKRLH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R013264
Calypte anna
Aan_R013264
N
0.797
Alligator_sinensis_CCG005180.2
Alligator sinensis
Alligator_sinensis_CCG005180.2
N
0.827
ENSAPLG00000013585
Anas platyrhynchos
ENSAPLG00000013585
N
0.797
ENSMGAG00000007805
Meleagris gallopavo
ENSMGAG00000007805
N
0.827