Alligator_sinensis_CCG006438.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG006438.1 T133168_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG006438.1 C2H2 ZF 130 152
Alligator_sinensis_CCG006438.1 C2H2 ZF 158 180
Alligator_sinensis_CCG006438.1 C2H2 ZF 274 297
Alligator_sinensis_CCG006438.1 C2H2 ZF 300 323
Alligator_sinensis_CCG006438.1 C2H2 ZF 345 367
Alligator_sinensis_CCG006438.1 C2H2 ZF 373 395

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G62085 Arabidopsis thaliana AT1G62085 N
AT1G62150 Arabidopsis thaliana AT1G62150 N
Bostr.22157s0091 Boechera stricta Bostr.22157s0091 N
Bostr.22157s0123 Boechera stricta Bostr.22157s0123 I
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N
Cagra.0043s0026 Capsella grandiflora Cagra.0043s0026 N
Carubv10020262m.g Capsella rubella Carubv10020262m.g N
Carubv10020263m.g Capsella rubella Carubv10020263m.g N
scaffold_200307.1 Arabidopsis lyrata scaffold_200307.1 N
scaffold_200344.1 Arabidopsis lyrata scaffold_200344.1 N