CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG007633.2
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG007633.2
T133206_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG007633.2
C2H2 ZF
61
83
YSCQLCPFASHYSSHLKRHMKTH
Alligator_sinensis_CCG007633.2
C2H2 ZF
89
111
FQCPQCDYASAQLVNLTRHLRTH
Alligator_sinensis_CCG007633.2
C2H2 ZF
117
139
YHCGGCGFTCSSLGNLKRHERIH
Alligator_sinensis_CCG007633.2
C2H2 ZF
145
167
FRCGACAYRCNQSRNLKRHMLSH
Alligator_sinensis_CCG007633.2
C2H2 ZF
269
291
FACSLCPFVTHYPNHLARHMKTH
Alligator_sinensis_CCG007633.2
C2H2 ZF
297
319
FACPLCPYASAHLDNLKRHQRVH
Alligator_sinensis_CCG007633.2
C2H2 ZF
325
347
YKCALCDYACGNLANLKRHGRIH
Alligator_sinensis_CCG007633.2
C2H2 ZF
353
375
FRCGLCSYSCNQSMNLKRHMLRH
Alligator_sinensis_CCG007633.2
C2H2 ZF
381
403
FQCRDCPYTTGHWDNYKRHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0000051501
Spirometra erinaceieuropaei
SPER_0000051501
N
SPER_0000271601
Spirometra erinaceieuropaei
SPER_0000271601
N
SPER_0000570401
Spirometra erinaceieuropaei
SPER_0000570401
N
SPER_0001138601
Spirometra erinaceieuropaei
SPER_0001138601
N
SPER_0001483201
Spirometra erinaceieuropaei
SPER_0001483201
N
SPER_0002355001
Spirometra erinaceieuropaei
SPER_0002355001
N
SPER_0002419001
Spirometra erinaceieuropaei
SPER_0002419001
N
SPER_0003273401
Spirometra erinaceieuropaei
SPER_0003273401
N
SPER_0003660701
Spirometra erinaceieuropaei
SPER_0003660701
N
SPER_0003839501
Spirometra erinaceieuropaei
SPER_0003839501
N
SPER_0003875701
Spirometra erinaceieuropaei
SPER_0003875701
N
SSLN_0000215901
Schistocephalus solidus
SSLN_0000215901
N
SSLN_0000275201
Schistocephalus solidus
SSLN_0000275201
N
SSLN_0000288601
Schistocephalus solidus
SSLN_0000288601
N
SSLN_0000486801
Schistocephalus solidus
SSLN_0000486801
N
SSLN_0000654601
Schistocephalus solidus
SSLN_0000654601
N
SSLN_0000757001
Schistocephalus solidus
SSLN_0000757001
N
SSLN_0000976201
Schistocephalus solidus
SSLN_0000976201
N
SSLN_0000976301
Schistocephalus solidus
SSLN_0000976301
N
SSLN_0000998701
Schistocephalus solidus
SSLN_0000998701
N
SSLN_0001068301
Schistocephalus solidus
SSLN_0001068301
N
SSLN_0001478001
Schistocephalus solidus
SSLN_0001478001
N
SSLN_0001662301
Schistocephalus solidus
SSLN_0001662301
N
SSLN_0001938701
Schistocephalus solidus
SSLN_0001938701
N
SSLN_0002021001
Schistocephalus solidus
SSLN_0002021001
N