Alligator_sinensis_CCG009248.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG009248.1 T133243_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG009248.1 C2H2 ZF 469 490
Alligator_sinensis_CCG009248.1 C2H2 ZF 509 531

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R002601 Aptenodytes forsteri Afo_R002601 N 0.803
Brh_R006725 Buceros rhinoceros Brh_R006725 N 0.803
Cmyd_10007742 Chelonia mydas Cmyd_10007742 N 0.803
ENSACAG00000007731 Anolis carolinensis ENSACAG00000007731 N 0.797
PRDM8 Anolis carolinensis ENSACAG00000010106 N 0.757
ENSAMEG00000019898 Ailuropoda melanoleuca ENSAMEG00000019898 N 0.802
ENSAMXG00000020060 Astyanax mexicanus ENSAMXG00000020060 N 0.757
ENSAPLG00000002179 Anas platyrhynchos ENSAPLG00000002179 N 0.803
PRDM8 Canis familiaris ENSCAFG00000008881 N 0.757
PRDM8 Callithrix jacchus ENSCJAG00000015064 N 0.757
ZNF488 Cavia porcellus ENSCPOG00000000536 N 0.779
PRDM8 Cavia porcellus ENSCPOG00000019738 N 0.757
ENSCSAG00000004478 Chlorocebus sabaeus ENSCSAG00000004478 N 0.757
prdm8b Danio rerio ENSDARG00000054683 N 0.757
PRDM8 Dasypus novemcinctus ENSDNOG00000011667 N 0.757
ZNF488 Equus caballus ENSECAG00000004188 N 0.782
ENSECAG00000017767 Equus caballus ENSECAG00000017767 N 0.757
ENSFALG00000007449 Ficedula albicollis ENSFALG00000007449 N 0.803
ZNF488 Felis catus ENSFCAG00000008960 N 0.802
ENSFCAG00000026794 Felis catus ENSFCAG00000026794 N 0.757
PRDM8 Homo sapiens ENSG00000152784 N 0.757
ZNF488 Homo sapiens ENSG00000265763 N 0.795
prdm8 Gasterosteus aculeatus ENSGACG00000007142 N 0.803
ENSGALG00000005975 Gallus gallus ENSGALG00000005975 N 0.803
ENSGALG00000026560 Gallus gallus ENSGALG00000026560 N 0.757
PRDM8 Gorilla gorilla ENSGGOG00000007501 N 0.757
ENSLACG00000001866 Latimeria chalumnae ENSLACG00000001866 N 0.757
ENSLACG00000016046 Latimeria chalumnae ENSLACG00000016046 N 0.803
ENSLOCG00000003895 Lepisosteus oculatus ENSLOCG00000003895 N 0.803
ENSLOCG00000007226 Lepisosteus oculatus ENSLOCG00000007226 N 0.757
ENSMEUG00000015872 Macropus eugenii ENSMEUG00000015872 N 0.757
ZNF488 Meleagris gallopavo ENSMGAG00000016885 N 0.803
PRDM8 Myotis lucifugus ENSMLUG00000030190 N 0.757
ZNF488 Myotis lucifugus ENSMLUG00000030552 N 0.795
PRDM8 Macaca mulatta ENSMMUG00000003338 N 0.757
PRDM8 Monodelphis domestica ENSMODG00000020789 N 0.757
ENSMODG00000025038 Monodelphis domestica ENSMODG00000025038 N 0.803
ENSMPUG00000006558 Mustela putorius furo ENSMPUG00000006558 N 0.757
Prdm8 Mus musculus ENSMUSG00000035456 N 0.757
ENSNLEG00000008504 Nomascus leucogenys ENSNLEG00000008504 N 0.757
ENSNLEG00000015447 Nomascus leucogenys ENSNLEG00000015447 N 0.795
ZNF488 Ornithorhynchus anatinus ENSOANG00000015412 N 0.803
ENSOARG00000018972 Ovis aries ENSOARG00000018972 N 0.757
ZNF488 Otolemur garnettii ENSOGAG00000001742 N 0.795
ENSOGAG00000026262 Otolemur garnettii ENSOGAG00000026262 N 0.757
ENSONIG00000009552 Oreochromis niloticus ENSONIG00000009552 N 0.803
ENSONIG00000014038 Oreochromis niloticus ENSONIG00000014038 N 0.757
prdm8 Oryzias latipes ENSORLG00000008745 N 0.803
prdm8b Oryzias latipes ENSORLG00000017786 N 0.757
ENSP00000379054 Macaca fascicularis ENSP00000379054 N 0.795
ENSP00000379054-D1 Bos grunniens ENSP00000379054-D1 N 0.795
ENSP00000406998 Macaca fascicularis ENSP00000406998 N 0.757
ENSPANG00000024349 Papio anubis ENSPANG00000024349 N 0.757
PRDM8 Procavia capensis ENSPCAG00000001081 N 0.757
ENSPFOG00000004161 Poecilia formosa ENSPFOG00000004161 N 0.803
ENSPFOG00000011716 Poecilia formosa ENSPFOG00000011716 N 0.757
ENSPMAG00000005756 Petromyzon marinus ENSPMAG00000005756 N 0.757
ENSPPYG00000014879 Pongo abelii ENSPPYG00000014879 N 0.757
Prdm8 Rattus norvegicus ENSRNOG00000002004 N 0.757
PRDM8 Sorex araneus ENSSARG00000009823 N 0.757
ENSSHAG00000015538 Sarcophilus harrisii ENSSHAG00000015538 N 0.803
ENSSHAG00000018147 Sarcophilus harrisii ENSSHAG00000018147 N 0.757
ENSSSCG00000010373 Sus scrofa ENSSSCG00000010373 N 0.802
ENSSTOG00000015147 Ictidomys tridecemlineatus ENSSTOG00000015147 N 0.795
ENSSTOG00000015688 Ictidomys tridecemlineatus ENSSTOG00000015688 N 0.757
PRDM8 Tupaia belangeri ENSTBEG00000006138 N 0.757
ZNF488 Tupaia belangeri ENSTBEG00000016364 N 0.786
ENSTGUG00000008050 Taeniopygia guttata ENSTGUG00000008050 N 0.803
prdm8 Tetraodon nigroviridis ENSTNIG00000016524 N 0.803
prdm8b Tetraodon nigroviridis ENSTNIG00000016712 N 0.757
prdm8b Takifugu rubripes ENSTRUG00000001003 N 0.757
prdm8 Takifugu rubripes ENSTRUG00000012560 N 0.803
ENSXMAG00000009993 Xiphophorus maculatus ENSXMAG00000009993 N 0.757
ENSXMAG00000014518 Xiphophorus maculatus ENSXMAG00000014518 N 0.803
Gfo_R002431 Geospiza fortis Gfo_R002431 N 0.803
Myotis_brandtii_ZNF488_10008743 Myotis brandtii Myotis_brandtii_ZNF488_10008743 N 0.802
Ogr08710 Ophisaurus gracilis Ogr08710 N 0.757
Pvit_15291 Pogona vitticeps Pvit_15291 N 0.757
prdm8 Xenopus tropicalis XB-GENE-984391 N 0.757