Alligator_sinensis_CCG011983.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG011983.1 T133289_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM12
M10213_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRDM12_01 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG011983.1 C2H2 ZF 242 264
Alligator_sinensis_CCG011983.1 C2H2 ZF 270 292
Alligator_sinensis_CCG011983.1 C2H2 ZF 298 322

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.9.58.1 Nectria haematococca e_gw1.9.58.1 N
PDIP_05920 Penicillium digitatum PDIP_05920 N
PEX1_045370 Penicillium expansum PEX1_045370 N
TRIREDRAFT_59353 Trichoderma reesei TRIREDRAFT_59353 N