Alligator_sinensis_CCG016702.1 (Alligator sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Alligator_sinensis_CCG016702.1 T133360_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB22
M04651_2.00 		Homo sapiens
HKCACWAYNRTWGTGMD
HKCACWAYNRTWGTGMD		 SELEX
Yin et al.(2017)
ZBTB22_eDBD_HT-SELEX 		0.822 0.977
ZBTB22
M04652_2.00 		Homo sapiens
HKCACWAYWRTWGTGMD
HKCACWAYWRTWGTGMD		 SELEX
Yin et al.(2017)
ZBTB22_eDBD_Methyl-HT-SELEX 		0.822 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG016702.1 C2H2 ZF 384 404
Alligator_sinensis_CCG016702.1 C2H2 ZF 410 432

Links

Other C2H2 ZF family TFs
Other Alligator sinensis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Brh_R011697 Buceros rhinoceros Brh_R011697 N 0.000
Cmyd_10020957 Chelonia mydas Cmyd_10020957 N 0.000
ENSAMXG00000000627 Astyanax mexicanus ENSAMXG00000000627 N 0.000
ENSAPLG00000014482 Anas platyrhynchos ENSAPLG00000014482 N 0.000
ENSBTAG00000019024 Bos taurus ENSBTAG00000019024 N 0.000
JAZF1 Callithrix jacchus ENSCJAG00000008331 N 0.000
ENSCSAG00000014355 Chlorocebus sabaeus ENSCSAG00000014355 N 0.000
jazf1b Danio rerio ENSDARG00000056793 N 0.000
jazf1a Danio rerio ENSDARG00000102551 N 0.000
ENSETEG00000002956 Echinops telfairi ENSETEG00000002956 N 0.000
ENSFCAG00000023035 Felis catus ENSFCAG00000023035 N 0.000
JAZF1 Homo sapiens ENSG00000153814 N 0.000
ENSGALG00000011126 Gallus gallus ENSGALG00000011126 N 0.000
JAZF1 Gorilla gorilla ENSGGOG00000011408 N 0.000
ENSLACG00000009439 Latimeria chalumnae ENSLACG00000009439 N 0.000
ENSLOCG00000011888 Lepisosteus oculatus ENSLOCG00000011888 N 0.000
ENSMGAG00000010727 Meleagris gallopavo ENSMGAG00000010727 N 0.000
ENSMLUG00000013130 Myotis lucifugus ENSMLUG00000013130 N 0.000
Jazf1 Mus musculus ENSMUSG00000063568 N 0.000
JAZF1 Otolemur garnettii ENSOGAG00000029759 N 0.000
ENSONIG00000002950 Oreochromis niloticus ENSONIG00000002950 N 0.000
ENSONIG00000004607 Oreochromis niloticus ENSONIG00000004607 N 0.000
jazf1b Oryzias latipes ENSORLG00000007516 N 0.000
ENSPCAG00000012434 Procavia capensis ENSPCAG00000012434 N 0.000
ENSPFOG00000002162 Poecilia formosa ENSPFOG00000002162 N 0.000
ENSPFOG00000004320 Poecilia formosa ENSPFOG00000004320 N 0.000
ENSPPYG00000017691 Pongo abelii ENSPPYG00000017691 N 0.000
JAZF1 Pan troglodytes ENSPTRG00000019027 N 0.000
Jazf1 Rattus norvegicus ENSRNOG00000027026 N 0.000
JAZF1 Sus scrofa ENSSSCG00000016691 N 0.000
ENSSTOG00000005946 Ictidomys tridecemlineatus ENSSTOG00000005946 N 0.000
JAZF1 Taeniopygia guttata ENSTGUG00000002953 N 0.000
jazf1a Tetraodon nigroviridis ENSTNIG00000009204 N 0.000
jazf1b Tetraodon nigroviridis ENSTNIG00000018430 N 0.000
jazf1b Takifugu rubripes ENSTRUG00000015434 N 0.000
jazf1a Takifugu rubripes ENSTRUG00000018220 N 0.000
ENSTSYG00000007474 Tarsius syrichta ENSTSYG00000007474 N 0.000
JAZF1 Tursiops truncatus ENSTTRG00000015292 N 0.000
ENSXMAG00000013895 Xiphophorus maculatus ENSXMAG00000013895 N 0.000
Myotis_brandtii_JAZF1_10034022 Myotis brandtii Myotis_brandtii_JAZF1_10034022 N 0.000
Tal_R005424 Tyto alba Tal_R005424 N 0.000
jazf1 Xenopus tropicalis XB-GENE-950886 N 0.000