CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG019089.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG019089.1
T133414_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG019089.1
C2H2 ZF
72
96
YHCTWDGCGWKFARSDELTRHYRKH
Alligator_sinensis_CCG019089.1
C2H2 ZF
102
124
FQCHLCERAFSRSDHLALHMKRH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
83 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCJAG00000032975
Callithrix jacchus
ENSCJAG00000032975
N
ENSONIG00000011564
Oreochromis niloticus
ENSONIG00000011564
N
ENSXMAG00000015437
Xiphophorus maculatus
ENSXMAG00000015437
N
scoc
Xenopus tropicalis
XB-GENE-949187
N