Ca_17124 (Cicer arietinum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ca_17124 T133714_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.827 0.977
IDD7
M06803_2.00 		Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN		 Dap-seq
OMalley et al.(2016)
IDD7_col_a 		0.797 0.953
IDD4
M06809_2.00 		Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW		 Dap-seq
OMalley et al.(2016)
IDD4_col_a 		0.797 0.884
MGP
M06795_2.00 		Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND		 Dap-seq
OMalley et al.(2016)
MGP_col_a 		0.797 0.884
MGP
M06796_2.00 		Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN		 Dap-seq
OMalley et al.(2016)
MGP_colamp_a 		0.797 0.884
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.792 0.907
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.792 0.907
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.792 0.860
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.792 0.860
NUC
M06822_2.00 		Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD
HRVWARAMGACAAAANNNNN		 Dap-seq
OMalley et al.(2016)
NUC_col_a 		0.774 0.860
NUC
M06823_2.00 		Arabidopsis thaliana
NDTTTTGTCGTYTWNYD
HRNWARACGACAAAAHN		 Dap-seq
OMalley et al.(2016)
NUC_colamp_a 		0.774 0.860
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.764 0.907
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.764 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_17124 C2H2 ZF 143 164
Ca_17124 C2H2 ZF 163 189

Links

Other C2H2 ZF family TFs
Other Cicer arietinum TFs

641 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003881 Calypte anna Aan_R003881 I
Aan_R015320 Calypte anna Aan_R015320 I
Afo_R009175 Aptenodytes forsteri Afo_R009175 I
Alligator_sinensis_CCG006627.1 Alligator sinensis Alligator_sinensis_CCG006627.1 I
Brh_R007445 Buceros rhinoceros Brh_R007445 I
Cmyd_10020158 Chelonia mydas Cmyd_10020158 I
ENSAMEG00000006817 Ailuropoda melanoleuca ENSAMEG00000006817 I
ENSAMXG00000017702 Astyanax mexicanus ENSAMXG00000017702 I
ENSAMXG00000018599 Astyanax mexicanus ENSAMXG00000018599 I
ENSAPLG00000003356 Anas platyrhynchos ENSAPLG00000003356 I
SALL1 Bos taurus ENSBTAG00000008544 I
ENSBTAP00000011264-D1 Bos grunniens ENSBTAP00000011264-D1 I
SALL1 Canis familiaris ENSCAFG00000009755 I
SALL1 Callithrix jacchus ENSCJAG00000001740 I
ENSCSAG00000005319 Chlorocebus sabaeus ENSCSAG00000005319 I
sall1a Danio rerio ENSDARG00000074319 I
SALL1 Dasypus novemcinctus ENSDNOG00000016413 I
ENSDORG00000004249 Dipodomys ordii ENSDORG00000004249 I
SALL1 Equus caballus ENSECAG00000011334 I
SALL1 Erinaceus europaeus ENSEEUG00000002014 I
SALL3 Echinops telfairi ENSETEG00000001481 I
SALL1 Echinops telfairi ENSETEG00000015150 I
ENSFALG00000000074 Ficedula albicollis ENSFALG00000000074 I
SALL1 Homo sapiens ENSG00000103449 I
ENSGALG00000003739 Gallus gallus ENSGALG00000003739 I
SALL1 Gorilla gorilla ENSGGOG00000000663 I
ENSGMOG00000006103 Gadus morhua ENSGMOG00000006103 I
ENSLACG00000003556 Latimeria chalumnae ENSLACG00000003556 I
SALL1 Loxodonta africana ENSLAFG00000015251 I
ENSMEUG00000012206 Macropus eugenii ENSMEUG00000012206 I
SALL1 Meleagris gallopavo ENSMGAG00000004704 I
SALL1 Myotis lucifugus ENSMLUG00000015541 I
SALL1 Monodelphis domestica ENSMODG00000013114 I
ENSMPUG00000003265 Mustela putorius furo ENSMPUG00000003265 I
Sall1 Mus musculus ENSMUSG00000031665 D
SALL1 Oryctolagus cuniculus ENSOCUG00000004364 I
ENSP00000251020 Macaca fascicularis ENSP00000251020 I
SALL1 Procavia capensis ENSPCAG00000008162 I
ENSPPYG00000007345 Pongo abelii ENSPPYG00000007345 I
ENSPSIG00000008582 Pelodiscus sinensis ENSPSIG00000008582 I
SALL1 Pan troglodytes ENSPTRG00000008108 I
SALL1 Sorex araneus ENSSARG00000000661 I
ENSSHAG00000009477 Sarcophilus harrisii ENSSHAG00000009477 I
SALL1 Sus scrofa ENSSSCG00000002836 I
ENSSTOG00000020885 Ictidomys tridecemlineatus ENSSTOG00000020885 I
SALL1 Taeniopygia guttata ENSTGUG00000007514 I
Gfo_R010713 Geospiza fortis Gfo_R010713 I
Pvit_15502 Pogona vitticeps Pvit_15502 I
Tal_R006196 Tyto alba Tal_R006196 I
sall3.L Xenopus laevis XB-GENE-866033 I