Cmyd_10017123 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10017123 T134449_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB6
M08364_2.00 		Homo sapiens
SBNGCTCCAKVDYCN
NGRHBMTGGAGCNVS		 ChIP-seq
Schmitges et al.(2016)
Q15916.MEME 		0.807 0.957
ZBTB6
M08940_2.00 		Homo sapiens
NRGCTCCAKCDYC
GRHGMTGGAGCYN		 Misc
Kulakovskiy et al.(2013)
ZBTB6_HUMAN.H11MO.0.C 		0.807 0.957
ZBTB6
M10307_2.00 		Homo sapiens
BGGCTCYAKSRYC
GRYSMTRGAGCCV		 Transfac
Matys et al.(2006)
V$ZID_01 		0.807 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10017123 C2H2 ZF 170 192
Cmyd_10017123 C2H2 ZF 195 217
Cmyd_10017123 C2H2 ZF 223 245
Cmyd_10017123 C2H2 ZF 251 274

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_008200 Trichomonas vaginalis TVAG_008200 N
TVAG_022950 Trichomonas vaginalis TVAG_022950 N
TVAG_033220 Trichomonas vaginalis TVAG_033220 N
TVAG_048830 Trichomonas vaginalis TVAG_048830 I
TVAG_050010 Trichomonas vaginalis TVAG_050010 I
TVAG_058570 Trichomonas vaginalis TVAG_058570 N
TVAG_072910 Trichomonas vaginalis TVAG_072910 N
TVAG_078880 Trichomonas vaginalis TVAG_078880 N
TVAG_085400 Trichomonas vaginalis TVAG_085400 I
TVAG_089940 Trichomonas vaginalis TVAG_089940 N
TVAG_106130 Trichomonas vaginalis TVAG_106130 N
TVAG_141650 Trichomonas vaginalis TVAG_141650 N
TVAG_148850 Trichomonas vaginalis TVAG_148850 N
TVAG_162250 Trichomonas vaginalis TVAG_162250 N
TVAG_167420 Trichomonas vaginalis TVAG_167420 N
TVAG_182100 Trichomonas vaginalis TVAG_182100 N
TVAG_197590 Trichomonas vaginalis TVAG_197590 N
TVAG_203210 Trichomonas vaginalis TVAG_203210 N
TVAG_208090 Trichomonas vaginalis TVAG_208090 I
TVAG_208170 Trichomonas vaginalis TVAG_208170 I
TVAG_227410 Trichomonas vaginalis TVAG_227410 N
TVAG_248200 Trichomonas vaginalis TVAG_248200 N
TVAG_255490 Trichomonas vaginalis TVAG_255490 I
TVAG_261460 Trichomonas vaginalis TVAG_261460 N
TVAG_271460 Trichomonas vaginalis TVAG_271460 N
TVAG_288340 Trichomonas vaginalis TVAG_288340 N
TVAG_315670 Trichomonas vaginalis TVAG_315670 I
TVAG_315700 Trichomonas vaginalis TVAG_315700 I
TVAG_320670 Trichomonas vaginalis TVAG_320670 I
TVAG_333410 Trichomonas vaginalis TVAG_333410 N
TVAG_347010 Trichomonas vaginalis TVAG_347010 N
TVAG_356580 Trichomonas vaginalis TVAG_356580 I
TVAG_384340 Trichomonas vaginalis TVAG_384340 I
TVAG_398170 Trichomonas vaginalis TVAG_398170 I
TVAG_418370 Trichomonas vaginalis TVAG_418370 I
TVAG_422850 Trichomonas vaginalis TVAG_422850 I
TVAG_431290 Trichomonas vaginalis TVAG_431290 I
TVAG_438570 Trichomonas vaginalis TVAG_438570 N
TVAG_439260 Trichomonas vaginalis TVAG_439260 N
TVAG_446510 Trichomonas vaginalis TVAG_446510 I
TVAG_464320 Trichomonas vaginalis TVAG_464320 I
TVAG_492320 Trichomonas vaginalis TVAG_492320 I
TVAG_500220 Trichomonas vaginalis TVAG_500220 I
TVAG_500600 Trichomonas vaginalis TVAG_500600 N
TVAG_503000 Trichomonas vaginalis TVAG_503000 N
TVAG_514140 Trichomonas vaginalis TVAG_514140 I
TVAG_518010 Trichomonas vaginalis TVAG_518010 I
TVAG_528950 Trichomonas vaginalis TVAG_528950 I
TVAG_535180 Trichomonas vaginalis TVAG_535180 I
TVAG_543070 Trichomonas vaginalis TVAG_543070 N
TVAG_552140 Trichomonas vaginalis TVAG_552140 N
TVAG_555690 Trichomonas vaginalis TVAG_555690 I
TVAG_556150 Trichomonas vaginalis TVAG_556150 I
TVAG_557940 Trichomonas vaginalis TVAG_557940 N
TVAG_563060 Trichomonas vaginalis TVAG_563060 I
TVAG_566490 Trichomonas vaginalis TVAG_566490 I
TVAG_574680 Trichomonas vaginalis TVAG_574680 N
TVAG_578630 Trichomonas vaginalis TVAG_578630 N
TVAG_583920 Trichomonas vaginalis TVAG_583920 N
TVAG_584810 Trichomonas vaginalis TVAG_584810 N
TVAG_591110 Trichomonas vaginalis TVAG_591110 N
TVAG_597140 Trichomonas vaginalis TVAG_597140 N
TVAG_598920 Trichomonas vaginalis TVAG_598920 N
TVAG_601320 Trichomonas vaginalis TVAG_601320 N