Cmyd_10021057 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10021057 T134476_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp281
M00139_2.00 		Mus musculus
NHDCCCCCHH
DDGGGGGHDN		 PBM
Badis et al.(2009)
Zfp281_0973 		0.813 0.978
ZNF281
M04509_2.00 		Homo sapiens
SCCCCTCCCCCM
KGGGGGAGGGGS		 SELEX
Yin et al.(2017)
ZNF281_eDBD_HT-SELEX 		0.813 0.978
ZNF281
M08321_2.00 		Homo sapiens
BNCCCCTCCCCC
GGGGGAGGGGNV		 ChIP-seq
Schmitges et al.(2016)
Q9Y2X9_1-4.RCADE 		0.813 0.978
Zfp281
M08025_2.00 		Mus musculus
CCCCWCCCCCMVCHB
VDGBKGGGGGWGGGG		 ChIP-seq
Chen et al.(2011)
GSE11329_zfp281 		0.813 0.978
ZNF281
M08906_2.00 		Homo sapiens
BCCCCTCCCCCHNYN
NRNDGGGGGAGGGGV		 Misc
Kulakovskiy et al.(2013)
ZN281_HUMAN.H11MO.0.A 		0.813 0.978
Zfp281
M08999_2.00 		Mus musculus
CCCCTCCCCCMMCBB
VVGKKGGGGGAGGGG		 Misc
Kulakovskiy et al.(2013)
ZN281_MOUSE.H11MO.0.A 		0.813 0.978
ZNF281
M10237_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZFP281_01 		0.813 0.978
ZNF281
M04510_2.00 		Homo sapiens
RCCCMTCCCCCR
YGGGGGAKGGGY		 SELEX
Yin et al.(2017)
ZNF281_eDBD_Methyl-HT-SELEX 		0.813 0.978
ZNF148
M10238_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CACCCBINDINGFACTOR_Q6 		0.759 0.802
ZNF148
M10239_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBP89_Q4_01 		0.759 0.802
ZNF148
M10240_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBP89_Q4 		0.759 0.802
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10021057 C2H2 ZF 161 183
Cmyd_10021057 C2H2 ZF 189 211
Cmyd_10021057 C2H2 ZF 217 239
Cmyd_10021057 C2H2 ZF 245 266

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003668 Calypte anna Aan_R003668 I 0.759
Aan_R014758 Calypte anna Aan_R014758 I 0.827
Afo_R004007 Aptenodytes forsteri Afo_R004007 I 0.827
Afo_R008251 Aptenodytes forsteri Afo_R008251 I 0.759
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I 0.827
Alligator_sinensis_CCG014066.1 Alligator sinensis Alligator_sinensis_CCG014066.1 I 0.759
Brh_R001493 Buceros rhinoceros Brh_R001493 I 0.759
Brh_R005182 Buceros rhinoceros Brh_R005182 I 0.827
Cmyd_10009615 Chelonia mydas Cmyd_10009615 I 0.759
ZNF281 Anolis carolinensis ENSACAG00000006286 I 0.822
ENSAMEG00000004258 Ailuropoda melanoleuca ENSAMEG00000004258 I 0.759
ENSAMXG00000006245 Astyanax mexicanus ENSAMXG00000006245 I 0.791
ENSAMXG00000015147 Astyanax mexicanus ENSAMXG00000015147 I 0.789
ENSAPLG00000008859 Anas platyrhynchos ENSAPLG00000008859 I 0.759
ZNF148 Bos taurus ENSBTAG00000040031 I 0.759
ZNF148 Canis familiaris ENSCAFG00000012574 I 0.759
ZNF281 Choloepus hoffmanni ENSCHOG00000004074 I 0.813
ZNF281 Callithrix jacchus ENSCJAG00000005104 I 0.813
ZNF148 Callithrix jacchus ENSCJAG00000006741 I 0.759
ENSCSAG00000000250 Chlorocebus sabaeus ENSCSAG00000000250 I 0.813
znf281a Danio rerio ENSDARG00000000567 I 0.789
znf281b Danio rerio ENSDARG00000035910 I 0.791
ZNF148 Dasypus novemcinctus ENSDNOG00000000280 I 0.759
ZNF281 Dasypus novemcinctus ENSDNOG00000016981 I 0.813
Zfp281 Dipodomys ordii ENSDORG00000002833 I 0.810
ENSDORG00000003955 Dipodomys ordii ENSDORG00000003955 I 0.759
ZNF148 Equus caballus ENSECAG00000013557 I 0.759
ZNF281 Equus caballus ENSECAG00000024354 I 0.813
ZNF281 Erinaceus europaeus ENSEEUG00000011443 I 0.813
ZNF148 Echinops telfairi ENSETEG00000002856 I 0.759
ENSFALG00000013520 Ficedula albicollis ENSFALG00000013520 I 0.759
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I 0.827
ZNF148 Felis catus ENSFCAG00000026852 I 0.759
ZNF281 Felis catus ENSFCAG00000028447 I 0.813
ZNF281 Homo sapiens ENSG00000162702 D 0.813
ZNF148 Homo sapiens ENSG00000163848 D 0.759
znf281b Gasterosteus aculeatus ENSGACG00000006858 I 0.779
znf281a Gasterosteus aculeatus ENSGACG00000009536 I 0.774
ZNF148 Gallus gallus ENSGALG00000012049 I 0.759
ZNF281 Gorilla gorilla ENSGGOG00000010349 I 0.813
ENSGMOG00000001704 Gadus morhua ENSGMOG00000001704 I 0.777
ENSGMOG00000008854 Gadus morhua ENSGMOG00000008854 I 0.777
ENSLACG00000014572 Latimeria chalumnae ENSLACG00000014572 I 0.801
ZNF148 Loxodonta africana ENSLAFG00000016025 I 0.759
ENSLOCG00000002769 Lepisosteus oculatus ENSLOCG00000002769 I 0.759
ENSLOCG00000011584 Lepisosteus oculatus ENSLOCG00000011584 I 0.783
ENSMEUG00000011709 Macropus eugenii ENSMEUG00000011709 I 0.815
ZNF281 Microcebus murinus ENSMICG00000001070 I 0.813
ZNF148 Macaca mulatta ENSMMUG00000001169 I 0.759
ZNF281 Macaca mulatta ENSMMUG00000007334 I 0.813
ZNF281 Monodelphis domestica ENSMODG00000012840 I 0.815
ZNF148 Monodelphis domestica ENSMODG00000018374 I 0.759
ENSMPUG00000004162 Mustela putorius furo ENSMPUG00000004162 I 0.759
ENSMPUG00000019246 Mustela putorius furo ENSMPUG00000019246 I 0.813
Zfp148 Mus musculus ENSMUSG00000022811 I 0.759
Zfp281 Mus musculus ENSMUSG00000041483 D 0.813
ENSNLEG00000000773 Nomascus leucogenys ENSNLEG00000000773 I 0.759
ENSNLEG00000018067 Nomascus leucogenys ENSNLEG00000018067 I 0.813
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I 0.815
ENSOARG00000020237 Ovis aries ENSOARG00000020237 I 0.759
ZNF281 Oryctolagus cuniculus ENSOCUG00000010120 I 0.813
ZNF281 Otolemur garnettii ENSOGAG00000010366 I 0.813
ZNF148 Otolemur garnettii ENSOGAG00000013652 I 0.759
ENSONIG00000000839 Oreochromis niloticus ENSONIG00000000839 I 0.774
ENSONIG00000004240 Oreochromis niloticus ENSONIG00000004240 I 0.759
ENSONIG00000016453 Oreochromis niloticus ENSONIG00000016453 I 0.779
znf281a Oryzias latipes ENSORLG00000002799 I 0.774
znf281b Oryzias latipes ENSORLG00000005292 I 0.779
ENSP00000356322 Macaca fascicularis ENSP00000356322 I 0.813
ENSP00000356322-D1 Bos grunniens ENSP00000356322-D1 I 0.810
ENSP00000420448 Macaca fascicularis ENSP00000420448 I 0.759
ENSP00000420448-D1 Bos grunniens ENSP00000420448-D1 I 0.759
ENSPANG00000004284 Papio anubis ENSPANG00000004284 I 0.759
ENSPANG00000017386 Papio anubis ENSPANG00000017386 I 0.813
ENSPFOG00000000851 Poecilia formosa ENSPFOG00000000851 I 0.779
ENSPFOG00000004115 Poecilia formosa ENSPFOG00000004115 I 0.759
ENSPFOG00000008024 Poecilia formosa ENSPFOG00000008024 I 0.789
ENSPPYG00000013462 Pongo abelii ENSPPYG00000013462 I 0.759
ENSPSIG00000003614 Pelodiscus sinensis ENSPSIG00000003614 I 0.759
ZNF281 Pan troglodytes ENSPTRG00000015318 I 0.813
ZNF148 Pteropus vampyrus ENSPVAG00000006133 I 0.759
Zfp148 Rattus norvegicus ENSRNOG00000001789 I 0.759
Zfp281 Rattus norvegicus ENSRNOG00000058643 I 0.813
ZNF148 Sorex araneus ENSSARG00000007257 I 0.759
ENSSHAG00000013855 Sarcophilus harrisii ENSSHAG00000013855 I 0.759
ZNF281 Sus scrofa ENSSSCG00000010911 I 0.813
ZNF148 Sus scrofa ENSSSCG00000011858 I 0.759
ENSSTOG00000027082 Ictidomys tridecemlineatus ENSSTOG00000027082 I 0.759
ZNF148 Tupaia belangeri ENSTBEG00000008435 I 0.759
ZNF148 Taeniopygia guttata ENSTGUG00000004010 I 0.759
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I 0.827
znf281a Tetraodon nigroviridis ENSTNIG00000016430 I 0.777
znf281b Tetraodon nigroviridis ENSTNIG00000018917 I 0.779
znf281b Takifugu rubripes ENSTRUG00000008207 I 0.779
znf281a Takifugu rubripes ENSTRUG00000016619 I 0.777
ENSTSYG00000007604 Tarsius syrichta ENSTSYG00000007604 I 0.813
ZNF281 Tursiops truncatus ENSTTRG00000004326 I 0.813
ZNF148 Tursiops truncatus ENSTTRG00000014714 I 0.759
Gfo_R001184 Geospiza fortis Gfo_R001184 I 0.759
Gfo_R006633 Geospiza fortis Gfo_R006633 I 0.827
Ogr00130 Ophisaurus gracilis Ogr00130 I 0.825
Pvit_14619 Pogona vitticeps Pvit_14619 I 0.822
Tal_R010113 Tyto alba Tal_R010113 I 0.827
Tal_R010256 Tyto alba Tal_R010256 I 0.759
znf281 Xenopus tropicalis XB-GENE-5933312 I 0.803
znf148 Xenopus tropicalis XB-GENE-996852 I 0.759