ENSBTAP00000016859-D1 (Bos grunniens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ENSBTAP00000016859-D1 T134557_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.827 0.989
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.827 0.989
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.827 0.989
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.827 0.989
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.827 0.989
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.827 0.989
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000016859-D1 C2H2 ZF 182 204
ENSBTAP00000016859-D1 C2H2 ZF 221 243
ENSBTAP00000016859-D1 C2H2 ZF 249 271
ENSBTAP00000016859-D1 C2H2 ZF 277 299
ENSBTAP00000016859-D1 C2H2 ZF 305 327
ENSBTAP00000016859-D1 C2H2 ZF 333 355
ENSBTAP00000016859-D1 C2H2 ZF 361 383
ENSBTAP00000016859-D1 C2H2 ZF 389 411
ENSBTAP00000016859-D1 C2H2 ZF 417 439
ENSBTAP00000016859-D1 C2H2 ZF 445 467
ENSBTAP00000016859-D1 C2H2 ZF 473 495
ENSBTAP00000016859-D1 C2H2 ZF 501 523

Links

Other C2H2 ZF family TFs
Other Bos grunniens TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF454 Bos taurus ENSBTAG00000004262 I 0.827
ZNF454 Canis familiaris ENSCAFG00000031168 I 0.825
ZNF454 Choloepus hoffmanni ENSCHOG00000002770 I 0.820
ZNF454 Callithrix jacchus ENSCJAG00000018857 I 0.826
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I 0.827
ZNF454 Equus caballus ENSECAG00000005115 I 0.806
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I 0.821
ZNF454 Felis catus ENSFCAG00000021971 I 0.823
ZNF454 Homo sapiens ENSG00000178187 D 0.827
ZNF454 Gorilla gorilla ENSGGOG00000022508 I 0.827
ZNF454 Myotis lucifugus ENSMLUG00000002894 I 0.818
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I 0.818
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I 0.825
Zfp454 Mus musculus ENSMUSG00000048728 I 0.781
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I 0.827
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I 0.826
ZNF454 Oryctolagus cuniculus ENSOCUG00000029119 I 0.794
ZNF454 Ochotona princeps ENSOPRG00000009035 I 0.811
ENSP00000326249 Macaca fascicularis ENSP00000326249 I 0.818
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I 0.821
ZNF454 Pan troglodytes ENSPTRG00000017611 I 0.827
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I 0.827
Znf454 Rattus norvegicus ENSRNOG00000022971 I 0.773
ZNF454 Sus scrofa ENSSSCG00000027351 I 0.798
ZNF454 Tupaia belangeri ENSTBEG00000000346 I 0.792
ZNF454 Tursiops truncatus ENSTTRG00000012880 I 0.823