Gfo_R002581 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R002581 T135679_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB11
M10112_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZBTB11_03 		0.779 0.897
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R002581 C2H2 ZF 453 475
Gfo_R002581 C2H2 ZF 481 503
Gfo_R002581 C2H2 ZF 532 554
Gfo_R002581 C2H2 ZF 560 582
Gfo_R002581 C2H2 ZF 588 610
Gfo_R002581 C2H2 ZF 616 638
Gfo_R002581 C2H2 ZF 647 669
Gfo_R002581 C2H2 ZF 703 727
Gfo_R002581 C2H2 ZF 740 761
Gfo_R002581 C2H2 ZF 767 789
Gfo_R002581 C2H2 ZF 795 818

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA021526 Oryza indica BGIOSGA021526 N
BRADI1G44270 Brachypodium distachyon BRADI1G44270 N
LPERR06G08490 Leersia perrieri LPERR06G08490 N
OBART06G09580 Oryza barthii OBART06G09580 N
OGLUM06G10380 Oryza glumaepatula OGLUM06G10380 N
OLONG_020517 Oryza longistaminata OLONG_020517 N
OMERI06G11370 Oryza meridionalis OMERI06G11370 N
ONIVA06G11110 Oryza nivara ONIVA06G11110 N
OPUNC06G09140 Oryza punctata OPUNC06G09140 N
ORGLA06G0090600 Oryza glaberrima ORGLA06G0090600 N
OS06G0252300 Oryza sativa OS06G0252300 N
Si005790m.g Setaria italica Si005790m.g N
TRIUR3_08913 Triticum urartu TRIUR3_08913 N
TRIUR3_19801 Triticum urartu TRIUR3_19801 N