Gfo_R006806 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R006806 T135749_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zbtb1
M00775_2.00 		Mus musculus
NHMMCGCRHN
NDYGCGKKDN		 PBM
Weirauch et al.(2013)
pTH2366 		0.821 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R006806 C2H2 ZF 532 553
Gfo_R006806 C2H2 ZF 572 598
Gfo_R006806 C2H2 ZF 604 626
Gfo_R006806 C2H2 ZF 660 682
Gfo_R006806 C2H2 ZF 684 707

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL000826 Aedes aegypti AAEL000826 N
AALB009100 Anopheles albimanus AALB009100 N
AATE013995 Anopheles atroparvus AATE013995 N
ACEP12019 Atta cephalotes ACEP12019 N
ACYPI53104 Acyrthosiphon pisum ACYPI53104 N
ADAC004556 Anopheles darlingi ADAC004556 N
AGAP002993 Anopheles gambiae AGAP002993 N
AMEC003748 Anopheles melas AMEC003748 N
AMEM008468 Anopheles merus AMEM008468 N
ASIS014267 Anopheles sinensis ASIS014267 N
ASTEI03270 Anopheles stephensi ASTEI03270 N
BGIBMGA002168 Bombyx mori BGIBMGA002168 N
Cflo_05366--XP_001120155.1_APIME Camponotus floridanus Cflo_05366--XP_001120155.1_APIME N
CLEC004985 Cimex lectularius CLEC004985 N
CPIJ019621 Culex quinquefasciatus CPIJ019621 N
CpipJ_CPIJ019621 Culex pipiens CpipJ_CPIJ019621 N
DAPPUDRAFT_196639 Daphnia pulex DAPPUDRAFT_196639 N
CG11966 Drosophila melanogaster FBgn0037645 N
GA11300 Drosophila pseudoobscura FBgn0071354 N
GF17275 Drosophila ananassae FBgn0094293 N
GG17407 Drosophila erecta FBgn0109633 N
GH18583 Drosophila grimshawi FBgn0126050 N
GI24513 Drosophila mojavensis FBgn0147235 N
GL21645 Drosophila persimilis FBgn0159238 N
GM26297 Drosophila sechellia FBgn0181151 N
GJ22686 Drosophila virilis FBgn0209790 N
GK11210 Drosophila willistoni FBgn0213221 N
GE24811 Drosophila yakuba FBgn0241912 N
GB48806 Apis mellifera GB48806 N
HHAL008764-PA Halyomorpha halys HHAL008764-PA N
HMEL015339 Heliconius melpomene HMEL015339 N
KGM_06311 Danaus plexippus KGM_06311 N
L798_13970 Zootermopsis nevadensis L798_13970 N
LCUP004423 Lucilia cuprina LCUP004423 N
LDEC005984 Leptinotarsa decemlineata LDEC005984 N
MCINX001754 Melitaea cinxia MCINX001754 N
MDOA010621 Musca domestica MDOA010621 N
NV13471 Nasonia vitripennis NV13471 N
PHUM221070 Pediculus humanus PHUM221070 N
PPAI000190 Phlebotomus papatasi PPAI000190 N
SINV11338 Solenopsis invicta SINV11338 N
TC003707 Tribolium castaneum TC003707 N