Gfo_R014333 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R014333 T135860_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB49
M02901_2.00 		Homo sapiens
TTYYGCYTGRCVBGTCA
TGACVBGYCARGCRRAA		 SELEX
Jolma et al.(2013)
ZBTB49_1 		0.819 0.969
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R014333 C2H2 ZF 394 416
Gfo_R014333 C2H2 ZF 422 444
Gfo_R014333 C2H2 ZF 450 472
Gfo_R014333 C2H2 ZF 478 500
Gfo_R014333 C2H2 ZF 506 528
Gfo_R014333 C2H2 ZF 534 556
Gfo_R014333 C2H2 ZF 562 584

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008590 Calypte anna Aan_R008590 I 0.827
Afo_R000623 Aptenodytes forsteri Afo_R000623 I 0.827
Brh_R008967 Buceros rhinoceros Brh_R008967 I 0.823
ZBTB49 Anolis carolinensis ENSACAG00000010957 I 0.796
ENSAMEG00000013670 Ailuropoda melanoleuca ENSAMEG00000013670 I 0.825
ENSAPLG00000003489 Anas platyrhynchos ENSAPLG00000003489 I 0.827
ZBTB49 Bos taurus ENSBTAG00000014680 I 0.814
ZBTB49 Canis familiaris ENSCAFG00000015688 I 0.825
ZBTB49 Callithrix jacchus ENSCJAG00000000119 I 0.819
ZBTB49 Cavia porcellus ENSCPOG00000007981 I 0.811
ENSCSAG00000016270 Chlorocebus sabaeus ENSCSAG00000016270 I 0.819
ZBTB49 Dasypus novemcinctus ENSDNOG00000016261 I 0.817
ZBTB49 Equus caballus ENSECAG00000013694 I 0.819
ENSFALG00000009426 Ficedula albicollis ENSFALG00000009426 I 0.817
ZBTB49 Felis catus ENSFCAG00000015510 I 0.778
ZBTB49 Homo sapiens ENSG00000168826 D 0.819
ZBTB49 Gallus gallus ENSGALG00000015009 I 0.827
ZBTB49 Gorilla gorilla ENSGGOG00000013012 I 0.819
ENSLACG00000007886 Latimeria chalumnae ENSLACG00000007886 I 0.804
ZBTB49 Loxodonta africana ENSLAFG00000016590 I 0.815
ENSLOCG00000009974 Lepisosteus oculatus ENSLOCG00000009974 I 0.777
ZBTB49 Meleagris gallopavo ENSMGAG00000012706 I 0.827
ENSMICG00000000204 Microcebus murinus ENSMICG00000000204 I 0.819
ZBTB49 Myotis lucifugus ENSMLUG00000009904 I 0.784
ZBTB49 Macaca mulatta ENSMMUG00000023394 I 0.819
ZBTB49 Monodelphis domestica ENSMODG00000001516 I 0.789
Zbtb49 Mus musculus ENSMUSG00000029127 I 0.803
ENSNLEG00000016142 Nomascus leucogenys ENSNLEG00000016142 I 0.819
ENSOARG00000007577 Ovis aries ENSOARG00000007577 I 0.813
ZBTB49 Oryctolagus cuniculus ENSOCUG00000007993 I 0.814
ZBTB49 Otolemur garnettii ENSOGAG00000000988 I 0.812
ENSP00000338807-D1 Bos grunniens ENSP00000338807-D1 I 0.814
ENSPANG00000015665 Papio anubis ENSPANG00000015665 I 0.819
ENSPPYG00000014601 Pongo abelii ENSPPYG00000014601 I 0.819
ENSPSIG00000015554 Pelodiscus sinensis ENSPSIG00000015554 I 0.827
ZBTB49 Pan troglodytes ENSPTRG00000015868 I 0.819
ZBTB49 Pteropus vampyrus ENSPVAG00000015185 I 0.813
Zbtb49 Rattus norvegicus ENSRNOG00000005633 I 0.803
ENSSHAG00000008414 Sarcophilus harrisii ENSSHAG00000008414 I 0.785
ZBTB49 Sus scrofa ENSSSCG00000008728 I 0.814
ENSSTOG00000000550 Ictidomys tridecemlineatus ENSSTOG00000000550 I 0.812
ENSTBEG00000005000 Tupaia belangeri ENSTBEG00000005000 I 0.816
ZBTB49 Taeniopygia guttata ENSTGUG00000009920 I 0.827
Myotis_brandtii_ZBTB49_10013405 Myotis brandtii Myotis_brandtii_ZBTB49_10013405 I 0.784
Pvit_18935 Pogona vitticeps Pvit_18935 I 0.781