Pvit_09122 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_09122 T137219_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYNN
M08283_2.00 		Homo sapiens
GRCTYTTAWTTT
AAAWTAARAGYC		 ChIP-seq
Schmitges et al.(2016)
Q9NPC7_1-4.RCADE 		0.771 0.940
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_09122 C2H2 ZF 306 327
Pvit_09122 C2H2 ZF 333 355
Pvit_09122 C2H2 ZF 361 384
Pvit_09122 C2H2 ZF 390 412
Pvit_09122 C2H2 ZF 418 440
Pvit_09122 C2H2 ZF 446 468
Pvit_09122 C2H2 ZF 474 496
Pvit_09122 C2H2 ZF 502 525

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYCFIDRAFT_192899 Pseudocercospora fijiensis MYCFIDRAFT_192899 N