Pvit_12096 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_12096 T137310_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Maz
M08988_2.00 		Mus musculus
YYBYYYYYYCNSYYCCWCCYYN
NRRGGWGGRRSNGRRRRRRVRR		 Misc
Kulakovskiy et al.(2013)
MAZ_MOUSE.H11MO.0.A 		0.795 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_12096 C2H2 ZF 238 260
Pvit_12096 C2H2 ZF 266 288
Pvit_12096 C2H2 ZF 296 319
Pvit_12096 C2H2 ZF 325 347
Pvit_12096 C2H2 ZF 351 372

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001391.4 Alligator sinensis Alligator_sinensis_CCG001391.4 I 0.814
MAZ Anolis carolinensis ENSACAG00000014698 I 0.827
ENSAMEG00000014864 Ailuropoda melanoleuca ENSAMEG00000014864 I 0.795
ENSBTAP00000026016-D1 Bos grunniens ENSBTAP00000026016-D1 I 0.795
MAZ Cavia porcellus ENSCPOG00000019886 I 0.795
ENSECAG00000024341 Equus caballus ENSECAG00000024341 I 0.795
MAZ Homo sapiens ENSG00000103495 D 0.795
ENSGACG00000007577 Gasterosteus aculeatus ENSGACG00000007577 N 0.761
ENSGACG00000014840 Gasterosteus aculeatus ENSGACG00000014840 I 0.779
ENSGMOG00000001761 Gadus morhua ENSGMOG00000001761 I 0.788
ENSGMOG00000016794 Gadus morhua ENSGMOG00000016794 N 0.770
Maz Mus musculus ENSMUSG00000030678 D 0.795
ENSNLEG00000007559 Nomascus leucogenys ENSNLEG00000007559 I 0.795
MAZ Otolemur garnettii ENSOGAG00000033940 I 0.795
ENSONIG00000011463 Oreochromis niloticus ENSONIG00000011463 N 0.770
ENSORLG00000000210 Oryzias latipes ENSORLG00000000210 N 0.786
ENSORLG00000006188 Oryzias latipes ENSORLG00000006188 N 0.770
MAZ Pan troglodytes ENSPTRG00000007968 I 0.795
Maz Rattus norvegicus ENSRNOG00000055082 I 0.795
ENSSHAG00000009478 Sarcophilus harrisii ENSSHAG00000009478 I 0.808
MAZ Sus scrofa ENSSSCG00000025321 I 0.795
ENSSTOG00000027842 Ictidomys tridecemlineatus ENSSTOG00000027842 I 0.795
ENSTRUG00000004091 Takifugu rubripes ENSTRUG00000004091 N 0.786
si:ch211-166g5.4 Takifugu rubripes ENSTRUG00000008158 N 0.768
ENSXMAG00000018598 Xiphophorus maculatus ENSXMAG00000018598 N 0.770
Myotis_brandtii_MAZ_10014461 Myotis brandtii Myotis_brandtii_MAZ_10014461 I 0.795