cassava44390.m1 (Manihot esculenta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 cassava44390.m1 T137884_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava44390.m1 C2H2 ZF 218 239
cassava44390.m1 C2H2 ZF 238 264

Links

Other C2H2 ZF family TFs
Other Manihot esculenta TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_006_00159 Aquilegia coerulea Aquca_006_00159 I
AT4G38900 Arabidopsis thaliana AT4G38900 I
BGIOSGA011761 Oryza indica BGIOSGA011761 N
BGIOSGA029105 Oryza indica BGIOSGA029105 I
BGIOSGA029106 Oryza indica BGIOSGA029106 I
BGIOSGA031505 Oryza indica BGIOSGA031505 N
Bo3g149620 Brassica oleracea Bo3g149620 I
Bo7g119550 Brassica oleracea Bo7g119550 I
Bostr.25542s0069 Boechera stricta Bostr.25542s0069 I
Bra010722 Brassica rapa Bra010722 I
Bra033582 Brassica rapa Bra033582 I
BRADI1G76690 Brachypodium distachyon BRADI1G76690 N
BRADI3G31890 Brachypodium distachyon BRADI3G31890 N
BRADI3G41980 Brachypodium distachyon BRADI3G41980 I
cassava30160.valid.m1 Manihot esculenta cassava30160.valid.m1 I
cassava38273.valid.m1 Manihot esculenta cassava38273.valid.m1 I
Ca_27693 Cicer arietinum Ca_27693 I
Ciclev10028062m.g Citrus clementina Ciclev10028062m.g I
Cla016124 Citrullus lanatus Cla016124 I
Cla016125 Citrullus lanatus Cla016125 I
Cucsa.382180 Cucumis sativus Cucsa.382180 I
Cucsa.382190 Cucumis sativus Cucsa.382190 I
estExt_gwp_gw1.C_200078 Physcomitrella patens estExt_gwp_gw1.C_200078 I
estExt_gwp_gw1.C_5120003 Physcomitrella patens estExt_gwp_gw1.C_5120003 I
Eucgr.I01335 Eucalyptus grandis Eucgr.I01335 I
evm.TU.supercontig_150.7 Carica papaya evm.TU.supercontig_150.7 I
e_gw1.20.99.1 Physcomitrella patens e_gw1.20.99.1 I
F775_32059 Aegilops tauschii F775_32059 I
F775_33214 Aegilops tauschii F775_33214 N
gene01680-v1.0-hybrid Fragaria vesca gene01680-v1.0-hybrid I
GLYMA11G11791 Glycine max GLYMA11G11791 I
GLYMA12G04050 Glycine max GLYMA12G04050 I
Gorai.001G243800 Gossypium raimondii Gorai.001G243800 I
Gorai.005G248900 Gossypium raimondii Gorai.005G248900 I
GRMZM2G353553 Zea mays GRMZM2G353553 N
GRMZM2G428184 Zea mays GRMZM2G428184 N
GRMZM2G473274 Zea mays GRMZM2G473274 N
GSMUA_Achr11G14990_001 Musa acuminata GSMUA_Achr11G14990_001 I
GSMUA_Achr3G12290_001 Musa acuminata GSMUA_Achr3G12290_001 I
GSMUA_Achr5G20200_001 Musa acuminata GSMUA_Achr5G20200_001 N
GSMUA_Achr5G25700_001 Musa acuminata GSMUA_Achr5G25700_001 I
GSMUA_AchrUn_randomG00680_001 Musa acuminata GSMUA_AchrUn_randomG00680_001 I
gw1.20.225.1 Physcomitrella patens gw1.20.225.1 I
LPERR03G02000 Leersia perrieri LPERR03G02000 N
LPERR10G12670 Leersia perrieri LPERR10G12670 N
Lus10018061.g Linum usitatissimum Lus10018061.g I
Lus10042057.g Linum usitatissimum Lus10042057.g I
mgf000302m Mimulus guttatus mgf000302m I
mgf004912m Mimulus guttatus mgf004912m I
MLOC_10725 Hordeum vulgare MLOC_10725 N
MLOC_66865 Hordeum vulgare MLOC_66865 N
MLOC_75510 Hordeum vulgare MLOC_75510 I
MTR_4g072090 Medicago truncatula MTR_4g072090 I
OB03G12130 Oryza brachyantha OB03G12130 N
OB10G23730 Oryza brachyantha OB10G23730 N
OBART03G02190 Oryza barthii OBART03G02190 N
OGLUM03G02140 Oryza glumaepatula OGLUM03G02140 N
OLONG_011520 Oryza longistaminata OLONG_011520 N
OLONG_016151 Oryza longistaminata OLONG_016151 N
OMERI03G02030 Oryza meridionalis OMERI03G02030 N
ONIVA03G01800 Oryza nivara ONIVA03G01800 N
OPUNC03G01930 Oryza punctata OPUNC03G01930 N
OPUNC10G15060 Oryza punctata OPUNC10G15060 N
orange1.1g007579m.g Citrus sinensis orange1.1g007579m.g I
ORGLA03G0019600 Oryza glaberrima ORGLA03G0019600 N
ORUFI03G01930 Oryza rufipogon ORUFI03G01930 N
OS03G0127500 Oryza sativa OS03G0127500 N
OS10G0531900 Oryza sativa OS10G0531900 N
Pavir.Ia02926 Panicum virgatum Pavir.Ia02926 N
Pavir.J19159 Panicum virgatum Pavir.J19159 N
Pavir.J22781 Panicum virgatum Pavir.J22781 N
Pavir.J27139 Panicum virgatum Pavir.J27139 N
Pavir.J29906 Panicum virgatum Pavir.J29906 N
PGSC0003DMG400001659 Solanum tuberosum PGSC0003DMG400001659 I
PK00843.1 Cannabis sativa PK00843.1 I
POPTR_0004s17080 Populus trichocarpa POPTR_0004s17080 I
POPTR_0009s12830 Populus trichocarpa POPTR_0009s12830 I
SapurV1A.0091s0130 Salix purpurea SapurV1A.0091s0130 I
SapurV1A.0379s0290 Salix purpurea SapurV1A.0379s0290 I
Sb01g030770 Sorghum bicolor Sb01g030770 N
Sb01g048710 Sorghum bicolor Sb01g048710 N
Sb06g021350 Sorghum bicolor Sb06g021350 I
SELMODRAFT_129846 Selaginella moellendorffii SELMODRAFT_129846 I
SELMODRAFT_34663 Selaginella moellendorffii SELMODRAFT_34663 I
SELMODRAFT_77868 Selaginella moellendorffii SELMODRAFT_77868 I
Si035841m.g Setaria italica Si035841m.g N
Si039566m.g Setaria italica Si039566m.g N
Solyc01g110480.2 Solanum lycopersicum Solyc01g110480.2 I
TCM_006766 Theobroma cacao TCM_006766 I
Thhalv10024895m.g Eutrema salsugineum Thhalv10024895m.g I
Traes_7BS_7B68879A9 Triticum aestivum Traes_7BS_7B68879A9 I
Traes_7DS_3463CAE33 Triticum aestivum Traes_7DS_3463CAE33 I
TRIUR3_15472 Triticum urartu TRIUR3_15472 N
TRIUR3_20880 Triticum urartu TRIUR3_20880 N
TRIUR3_31242 Triticum urartu TRIUR3_31242 I
VIT_03s0038g00860 Vitis vinifera VIT_03s0038g00860 I