e_gw.6.95.1 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw.6.95.1 T138379_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.766 0.847
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.766 0.847
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.766 0.847
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.6.95.1 C2H2 ZF 1 21
e_gw.6.95.1 C2H2 ZF 31 52
e_gw.6.95.1 C2H2 ZF 56 78
e_gw.6.95.1 C2H2 ZF 84 106
e_gw.6.95.1 C2H2 ZF 112 133

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02184 Capronia coronata A1O1_02184 N
A1O3_00595 Capronia epimyces A1O3_00595 N
A1O5_08469 Cladophialophora psammophila A1O5_08469 N
A1O7_08052 Cladophialophora yegresii A1O7_08052 N
A1O9_08156 Exophiala aquamarina A1O9_08156 N
BGHDH14_bgh03227 Blumeria graminis BGHDH14_bgh03227 N
CCM_02838 Cordyceps militaris CCM_02838 N
HMPREF1120_02535 Exophiala dermatitidis HMPREF1120_02535 N
HMPREF1541_03614 Cyphellophora europaea HMPREF1541_03614 N
MPH_09912 Macrophomina phaseolina MPH_09912 N
Pc16g07900 Penicillium chrysogenum Pc16g07900 N
PCH_Pc16g07900 Penicillium rubens PCH_Pc16g07900 N
PDE_02813 Penicillium oxalicum PDE_02813 N
PDIP_21470 Penicillium digitatum PDIP_21470 N
PV04_08573 Capronia semiimmersa PV04_08573 N
PV05_01125 Exophiala xenobiotica PV05_01125 N
PV06_02454 Exophiala oligosperma PV06_02454 N
PV07_01287 Cladophialophora immunda PV07_01287 N
PV08_02650 Exophiala spinifera PV08_02650 N
PV10_04851 Exophiala mesophila PV10_04851 N
U727_00434000221 Penicillium solitum U727_00434000221 N
UCRNP2_4796 Neofusicoccum parvum UCRNP2_4796 N
VDAG_06193 Verticillium dahliae VDAG_06193 N
Z517_04798 Fonsecaea pedrosoi Z517_04798 N
Z519_05583 Cladophialophora bantiana Z519_05583 N