estExt_fgenesh2_pg.C_140189 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_140189 T138611_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_140189 C2H2 ZF 879 902
estExt_fgenesh2_pg.C_140189 C2H2 ZF 908 930
estExt_fgenesh2_pg.C_140189 C2H2 ZF 936 958
estExt_fgenesh2_pg.C_140189 C2H2 ZF 964 986
estExt_fgenesh2_pg.C_140189 C2H2 ZF 993 1015
estExt_fgenesh2_pg.C_140189 C2H2 ZF 1021 1043
estExt_fgenesh2_pg.C_140189 C2H2 ZF 1053 1075

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OBART11G14710 Oryza barthii OBART11G14710 N
OGLUM11G14240 Oryza glumaepatula OGLUM11G14240 N
OMERI11G12060 Oryza meridionalis OMERI11G12060 N
ONIVA11G14130 Oryza nivara ONIVA11G14130 N
ORGLA11G0125700 Oryza glaberrima ORGLA11G0125700 N
ORUFI11G15720 Oryza rufipogon ORUFI11G15720 N
OS11G0512100 Oryza sativa OS11G0512100 N