CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_90123
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh2_pg.C_90123
T138759_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_90123
C2H2 ZF
70
91
LVCGTCRQLFTTVALMRKHKSG
estExt_fgenesh2_pg.C_90123
C2H2 ZF
125
147
LCRECWEEFDGPWHLMHHAGAVH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MAC_00388
Metarhizium acridum
MAC_00388
N
MAJ_01104
Metarhizium majus
MAJ_01104
N
MAM_02458
Metarhizium album
MAM_02458
N
MANI_008549
Metarhizium anisopliae
MANI_008549
N
MBR_01120
Metarhizium brunneum
MBR_01120
N
MGU_10592
Metarhizium guizhouense
MGU_10592
N
S40285_07853
Stachybotrys chlorohalonata
S40285_07853
N
S40288_01115
Stachybotrys chartarum
S40288_01115
N
TRIREDRAFT_120698
Trichoderma reesei
TRIREDRAFT_120698
N
TRIVIDRAFT_40391
Trichoderma virens
TRIVIDRAFT_40391
N