CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshPB_pg.C_10669
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgeneshPB_pg.C_10669
T138829_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshPB_pg.C_10669
C2H2 ZF
438
460
YKCSLCIKRFTRPSSLATHMHSH
estExt_fgeneshPB_pg.C_10669
C2H2 ZF
469
493
YKCSVDGCGRRFSVVSNLRRHAKIH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA032902
Oryza indica
BGIOSGA032902
N
BGIOSGA032906
Oryza indica
BGIOSGA032906
N
OBART10G09850
Oryza barthii
OBART10G09850
N
OGLUM10G09710
Oryza glumaepatula
OGLUM10G09710
N
OLONG_014466
Oryza longistaminata
OLONG_014466
N
OMERI10G07210
Oryza meridionalis
OMERI10G07210
N
ONIVA10G09240
Oryza nivara
ONIVA10G09240
N
ORGLA10G0084900
Oryza glaberrima
ORGLA10G0084900
N
ORUFI10G10350
Oryza rufipogon
ORUFI10G10350
N