CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.sca_1_chr1_3_0001258
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.sca_1_chr1_3_0001258
T139029_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_1_chr1_3_0001258
C2H2 ZF
402
423
VKCPDCNKIFPRKWNMKRHQKK
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PaG_02387
Pseudozyma aphidis
PaG_02387
N
PHSY_007189
Pseudozyma hubeiensis
PHSY_007189
N
PSEUBRA_SCAF3g04232
Pseudozyma brasiliensis
PSEUBRA_SCAF3g04232
N
sr12101
Sporisorium reilianum
sr12101
N
UM00808
Ustilago maydis
UM00808
N