CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_3_chr4_2_0000778
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.sca_3_chr4_2_0000778
T139036_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_3_chr4_2_0000778
C2H2 ZF
152
173
VRCDKCGKGYKHSSCLTKHLLV
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g26055
Steinernema carpocapsae
L596_g26055
N
L889_g2530
Steinernema feltiae
L889_g2530
N
L893_g26031
Steinernema glaseri
L893_g26031
N
L898_g26447
Steinernema monticolum
L898_g26447
N