CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.sca_6_chr9_2_0000541
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.sca_6_chr9_2_0000541
T139041_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.sca_6_chr9_2_0000541
C2H2 ZF
243
269
YVCPVIGCGKTFKNSRGIIGHLKSPTH
fgenesh1_pg.sca_6_chr9_2_0000541
C2H2 ZF
274
294
YRCPYCLRTFNSLAAITSHAE
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CLEC005699
Cimex lectularius
CLEC005699
I
GA19962
Drosophila pseudoobscura
FBgn0079958
I
GF16617
Drosophila ananassae
FBgn0093638
I
GG17195
Drosophila erecta
FBgn0109422
I
GH23160
Drosophila grimshawi
FBgn0130617
I
GI10303
Drosophila mojavensis
FBgn0133068
I
GL12249
Drosophila persimilis
FBgn0149856
I
GM26073
Drosophila sechellia
FBgn0180928
I
GD20637
Drosophila simulans
FBgn0192103
I
GJ10157
Drosophila virilis
FBgn0197445
I
GK11983
Drosophila willistoni
FBgn0213994
I
GE10087
Drosophila yakuba
FBgn0227969
I
l(3)neo38
Drosophila melanogaster
FBgn0265276
D
RPRC001305
Rhodnius prolixus
RPRC001305
I